RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
COLCA1-201ENST00000355430 PLNP26678 52 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 C10orf142B7Z368 130 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
COLCA1-201ENST00000355430 PRR25Q96S07 402 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 C22orf46C9J442 243 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 UTF1Q5T230 341 aa9.72□□□□□ -0.85
COLCA1-201ENST00000355430 PROP1O75360 226 aa9.71□□□□□ -0.85
COLCA1-201ENST00000355430 MSMPQ1L6U9 139 aa9.71□□□□□ -0.85
COLCA1-201ENST00000355430 GP9P14770 177 aa9.71□□□□□ -0.85
COLCA1-201ENST00000355430 EIF4EBP1Q13541 118 aaPredicted RBP9.71□□□□□ -0.85
COLCA1-201ENST00000355430 LGALS9BQ3B8N2 356 aa9.71□□□□□ -0.85
COLCA1-201ENST00000355430 LGALS9CQ6DKI2 356 aa9.71□□□□□ -0.85
COLCA1-201ENST00000355430 ZNF503Q96F45 646 aa9.71□□□□□ -0.86
COLCA1-201ENST00000355430 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
COLCA1-201ENST00000355430 E7EUB6 86 aa9.71□□□□□ -0.86
COLCA1-201ENST00000355430 PSCAO43653 123 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 TTC32Q5I0X7 151 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 IGFBPL1Q8WX77 278 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 ZNF747Q9BV97 191 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 NCKAP5O14513 1909 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
COLCA1-201ENST00000355430 C9orf66Q5T8R8 295 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 SEM1Q6ZVN7 128 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 TRAV2A0A0B4J234 112 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 H3BUA1 57 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 LOXL1Q08397 574 aaPredicted RBP9.7□□□□□ -0.86
COLCA1-201ENST00000355430 ADAMTSL5Q6ZMM2 481 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 GTSF1Q8WW33 167 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
COLCA1-201ENST00000355430 PAX2Q02962 417 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
COLCA1-201ENST00000355430 OTOGLQ3ZCN5 2332 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 MED12LQ86YW9 2145 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 MRPL36Q9P0J6 103 aaKnown RBP9.69□□□□□ -0.86
COLCA1-201ENST00000355430 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 ATG2AQ2TAZ0 1938 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 DEFB131AP59861 70 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 MEIG1Q5JSS6 88 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 CSTL1Q9H114 145 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 FCN3O75636 299 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 C1orf229Q6ZS94 237 aaPredicted RBP9.69□□□□□ -0.86
COLCA1-201ENST00000355430 C8orf31Q8N9H6 132 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 VCX2Q9H322 139 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 DKK2Q9UBU2 259 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 CFAP161Q6P656 301 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 Q8N8P6 123 aa9.69□□□□□ -0.86
COLCA1-201ENST00000355430 G3V318 75 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 MALP21145 153 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 HLA-DMBP28068 263 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 MRAP2Q96G30 205 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 K7EP34 96 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
COLCA1-201ENST00000355430 ACACBO00763 2458 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 A0A087WX48 190 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 IGLV2-23P01705 113 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 MTURNQ8N3F0 131 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 CEP192Q8TEP8 1941 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 GTF3C1Q12789 2109 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 IGLV2-8P01709 118 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
COLCA1-201ENST00000355430 K7EP13 123 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 TP53TG3Q9ULZ0 132 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 CCL24O00175 119 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
COLCA1-201ENST00000355430 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 TRAV12-3A0A0B4J271 114 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 K7ERJ3 54 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 MRAPQ8TCY5 172 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 C19orf84I3L1E1 186 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 NDUFA4O00483 81 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 DAD1P61803 113 aa9.66□□□□□ -0.86
COLCA1-201ENST00000355430 IGKV3D-20A0A0C4DH25 116 aa9.65□□□□□ -0.86
COLCA1-201ENST00000355430 I3L2K1 104 aa9.65□□□□□ -0.86
COLCA1-201ENST00000355430 A0A1W2PPM0 123 aa9.65□□□□□ -0.86
COLCA1-201ENST00000355430 A8MWV9 139 aa9.65□□□□□ -0.86
COLCA1-201ENST00000355430 OR11H6Q8NGC7 330 aa9.65□□□□□ -0.86
COLCA1-201ENST00000355430 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
COLCA1-201ENST00000355430 MED13Q9UHV7 2174 aa9.65□□□□□ -0.86
COLCA1-201ENST00000355430 A0A087WWL8 130 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 CLPSL1A2RUU4 121 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 CD28P10747 220 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 TMEM86BQ8N661 226 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 FOXE3Q13461 319 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 PCP2Q8IVA1 136 aa9.65□□□□□ -0.87
COLCA1-201ENST00000355430 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
COLCA1-201ENST00000355430 MRPL35Q9NZE8 188 aaKnown RBP9.64□□□□□ -0.87
COLCA1-201ENST00000355430 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms