RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 SBF1O95248 1867 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 DSCR9P59020 149 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 ARTNQ5T4W7 220 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 ORMDL1Q9P0S3 153 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 ATP6V0E1O15342 81 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 TRPM7Q96QT4 1865 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 UBE2E2Q96LR5 201 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 IGF2BP2-AS1Q96M15 143 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 PRDM6Q9NQX0 595 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 CEP250Q9BV73 2442 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 SPINK13Q1W4C9 94 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 NDUFA4O00483 81 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 DEFB131AP59861 70 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 TEX36Q5VZQ5 186 aa10.08□□□□□ -0.8
SYNCRIP-201ENST00000355238 MRPL53Q96EL3 112 aaKnown RBP10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 LENEPQ9Y5L5 61 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 MED12Q93074 2177 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 ZNF134P52741 427 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 KLK9Q9UKQ9 250 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 SAA4P35542 130 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 ZNF491Q8N8L2 437 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 PLXNA3P51805 1871 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 HERV-K104P63124 156 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 Q6ZR03 302 aa10.07□□□□□ -0.8
SYNCRIP-201ENST00000355238 A0A1B0GX51 115 aa10.06□□□□□ -0.8
SYNCRIP-201ENST00000355238 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
SYNCRIP-201ENST00000355238 AKAP6Q13023 2319 aa10.06□□□□□ -0.8
SYNCRIP-201ENST00000355238 COL8A2P25067 703 aa10.06□□□□□ -0.8
SYNCRIP-201ENST00000355238 ABCA7Q8IZY2 2146 aa10.06□□□□□ -0.8
SYNCRIP-201ENST00000355238 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
SYNCRIP-201ENST00000355238 RS1O15537 224 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 CFHR4Q92496 578 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 UBE2E1P51965 193 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 TPSG1Q9NRR2 321 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 ATP5G1P05496 136 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 TRAV25A0A0B4J276 109 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 A4D1N5 150 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 BRD3OSQ6XYD6 125 aa10.05□□□□□ -0.8
SYNCRIP-201ENST00000355238 F6UB75 175 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 MYLKQ15746 1914 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 XIRP1Q702N8 1843 aaKnown RBP10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 A0A0G2JNJ9 132 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 B4DSR2 109 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 ZNF524Q96C55 264 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 Q9UFV3 132 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 H0YGX0 51 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 ZSWIM8A7E2V4 1837 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 TRBV10-2A0A0K0K1G8 114 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 H3BT86 120 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 WISP1O95388 367 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 NBL1P41271 181 aa10.04□□□□□ -0.8
SYNCRIP-201ENST00000355238 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 NXPH4O95158 308 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 CD59P13987 128 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 LOXP28300 417 aaPredicted RBP10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 Q9H8V8 135 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 C8orf31Q8N9H6 132 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 IGHG2P01859 326 aa10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
SYNCRIP-201ENST00000355238 GP9P14770 177 aa10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 IGFBPL1Q8WX77 278 aa10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 TMEM105Q8N8V8 129 aa10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 NKAPP1Q8N9T2 125 aa10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 GATA1P15976 413 aaPredicted RBP10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 SLC25A29Q8N8R3 303 aa10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
SYNCRIP-201ENST00000355238 E9PLD3 99 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 Q71RC1 249 aaPredicted RBP10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 E7EQL1 145 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 C11orf44Q8N8P7 122 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 DEFB130BP0DP73 79 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 DEFB130AP0DP74 79 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 LYPD6Q86Y78 171 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 KLHL30-AS1Q8NEE0 82 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 PSMB8P28062 276 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 TSC2P49815 1807 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
SYNCRIP-201ENST00000355238 Q6ZSR3 168 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 GTSF1Q8WW33 167 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 PROK2Q9HC23 129 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 XCL2Q9UBD3 114 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms