RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PDE6HQ13956 83 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 MDS2Q8NDY4 140 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 RNF125Q96EQ8 232 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 SPRY4Q9C004 299 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 KALRNO60229 2985 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 TEX22C9J3V5 150 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 SCGB1C2P0DMR2 95 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 ARL3P36405 182 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 Q6Q795 121 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 NRACQ8N912 160 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 VKORC1Q9BQB6 163 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 SPENQ96T58 3664 aaKnown RBP6.09□□□□□ -1.43
CD46-203ENST00000354848 CACNA1GO43497 2377 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 TRAV26-2A0A0B4J265 109 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 SLC25A20O43772 301 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 TRGV3P03979 118 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 SRSF2Q01130 221 aaKnown RBP6.09□□□□□ -1.43
CD46-203ENST00000354848 Q6ZQT7 251 aa6.09□□□□□ -1.43
CD46-203ENST00000354848 COX6B1P14854 86 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 C1orf210Q8IVY1 113 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 FCN3O75636 299 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 CRYGBP07316 175 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 SLC25A16P16260 332 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 CRIP2P52943 208 aaPredicted RBP6.08□□□□□ -1.44
CD46-203ENST00000354848 TMEM200BQ69YZ2 307 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 NEXN-AS1Q8NBZ9 246 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 SIGLEC9Q9Y336 463 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 ZZEF1O43149 2961 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 CFC1BP0CG36 223 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 CFC1P0CG37 223 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 TNFAIP6P98066 277 aaPredicted RBP6.08□□□□□ -1.44
CD46-203ENST00000354848 C10orf126Q8N4M7 172 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 LINC00311Q8N616 119 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 KLHL30-AS1Q8NEE0 82 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 KLK15Q9H2R5 256 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 ONECUT1Q9UBC0 465 aa6.08□□□□□ -1.44
CD46-203ENST00000354848 C9JAW5 83 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 MEIG1Q5JSS6 88 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 TDHQ8IZJ6 230 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 K7EIM0 57 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 M0QXV9 152 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 IGHV1-46P01743 117 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 TEX36Q5VZQ5 186 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 IGFL4Q6B9Z1 124 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 IL17RELQ6ZVW7 336 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 C9orf106Q8NAJ2 232 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 SLC25A15Q9Y619 301 aa6.07□□□□□ -1.44
CD46-203ENST00000354848 COL27A1Q8IZC6 1860 aaPredicted RBP6.07□□□□□ -1.44
CD46-203ENST00000354848 IGLV3-9A0A075B6K5 115 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 CFIP05156 583 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 GLRXP35754 106 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 ZNF672Q499Z4 452 aaPredicted RBP6.06□□□□□ -1.44
CD46-203ENST00000354848 TRPT1Q86TN4 253 aaKnown RBP6.06□□□□□ -1.44
CD46-203ENST00000354848 Q8N1Y9 231 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 RASL10AQ92737 203 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 ODF3Q96PU9 254 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 YAE1D1Q9NRH1 226 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 SPANXA1Q9NS26 97 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 VPREB3Q9UKI3 123 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 A0A0J9YY99 117 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 M0R1B8 84 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 ID1P41134 155 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 PRR30Q53SZ7 412 aaPredicted RBP6.06□□□□□ -1.44
CD46-203ENST00000354848 TMEM105Q8N8V8 129 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 NTN5Q8WTR8 489 aaPredicted RBP6.06□□□□□ -1.44
CD46-203ENST00000354848 PPDPFQ9H3Y8 114 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 SCGB2A1O75556 95 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 IGHG4P01861 327 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 CXCL12P48061 93 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 C8orf31Q8N9H6 132 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 C15orf53Q8NAA6 179 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 CFHR4Q92496 578 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 TOMM6Q96B49 74 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 MDFICQ9P1T7 246 aa6.06□□□□□ -1.44
CD46-203ENST00000354848 IGHV3-30P01768 117 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 IGHV3-30-5P0DP03 117 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 OR10J6PQ8NGY7 276 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 BAALCQ8WXS3 180 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 SMIM2Q9BVW6 85 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 PRO1854Q9UHT4 67 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 S4R3C0 116 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 ASPMQ8IZT6 3477 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 IGKV3D-20A0A0C4DH25 116 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 ERCC8Q13216 396 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 Q6ZS46 218 aa6.05□□□□□ -1.44
CD46-203ENST00000354848 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 PATE3B3GLJ2 98 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 ORMDL2Q53FV1 153 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 DYNAPQ8N1N2 210 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 C3orf56Q8N813 242 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 C11orf21Q9P2W6 132 aa6.04□□□□□ -1.44
CD46-203ENST00000354848 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
CD46-203ENST00000354848 IGHV7-4-1A0A0J9YVY3 117 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 RPL7P18124 248 aaKnown RBP6.03□□□□□ -1.44
CD46-203ENST00000354848 CCL8P80075 99 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 TMEM155Q4W5P6 130 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 GFRALQ6UXV0 394 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms