RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 A6NDX4 124 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 C16orf92Q96LL3 132 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 LENEPQ9Y5L5 61 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 PKD1L2Q7Z442 2459 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 COX8AP10176 69 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 USMG5Q96IX5 58 aa16.9■□□□□ 0.3
UPF3A-201ENST00000351487 IGHV7-4-1A0A0J9YVY3 117 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 TRBV12-3P01733 135 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 MPV17L2Q567V2 206 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 UNQ9165/PRO28630Q6UXU0 137 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 COX11Q9Y6N1 276 aa16.89■□□□□ 0.29
UPF3A-201ENST00000351487 ATP5J2P56134 94 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 IFI27L1Q96BM0 104 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 NXT2Q9NPJ8 142 aaKnown RBP16.88■□□□□ 0.29
UPF3A-201ENST00000351487 IGHV4-30-2A0A087WSY4 118 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 H3BUX3 64 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 SMAD7O15105 426 aaKnown RBP16.88■□□□□ 0.29
UPF3A-201ENST00000351487 TNFRSF6BO95407 300 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 GPHB5Q86YW7 130 aa16.88■□□□□ 0.29
UPF3A-201ENST00000351487 IGHV4-4A0A075B6R2 117 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 GAS8-AS1O95177 125 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 MSMBP08118 114 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 FXYD7P58549 80 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 FOXE3Q13461 319 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 LY6EQ16553 131 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 C12orf54Q6X4T0 127 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 C20orf173Q96LM9 149 aa16.87■□□□□ 0.29
UPF3A-201ENST00000351487 SOCS3O14543 225 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 SNAI2O43623 268 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 NUDT3O95989 172 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 CACNG7P62955 275 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 BVES-AS1Q5T3Y7 98 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 ZNF738Q8NE65 137 aa16.86■□□□□ 0.29
UPF3A-201ENST00000351487 OR1N2Q8NGR9 330 aa16.85■□□□□ 0.29
UPF3A-201ENST00000351487 SPTAN1Q13813 2472 aaKnown RBP16.84■□□□□ 0.29
UPF3A-201ENST00000351487 C2orf91Q6ZV80 131 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 LINC00477Q96M19 166 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 FCER1GP30273 86 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 PRR9Q5T870 116 aa16.84■□□□□ 0.29
UPF3A-201ENST00000351487 FGF6P10767 208 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 EVI2AP22794 236 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 ANKRD39Q53RE8 183 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 Q6ZVH6 145 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 DEFB125Q8N687 156 aa16.83■□□□□ 0.28
UPF3A-201ENST00000351487 OVOL1O14753 267 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 SMIM15Q7Z3B0 74 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 KLK15Q9H2R5 256 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 IGLV2-18A0A075B6J9 118 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 PRSS47A8MTI9 375 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 IGLV1-40P01703 118 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 Q6ZQT7 251 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 ZFAND2AQ8N6M9 145 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 Q8N8P6 123 aa16.82■□□□□ 0.28
UPF3A-201ENST00000351487 GATA1P15976 413 aaPredicted RBP16.81■□□□□ 0.28
UPF3A-201ENST00000351487 BLCAPP62952 87 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 IGHV3-11P01762 117 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 PF4V1P10720 104 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 LEPP41159 167 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 OR4X2Q8NGF9 303 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 OR2K2Q8NGT1 345 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 OR10J6PQ8NGY7 276 aa16.81■□□□□ 0.28
UPF3A-201ENST00000351487 CACNA1AO00555 2505 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 DOPEY1Q5JWR5 2465 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 A0A0G2JLM5 398 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 CFHR3Q02985 330 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 NRACQ8N912 160 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 ZNF580Q9UK33 172 aa16.8■□□□□ 0.28
UPF3A-201ENST00000351487 B4DSR2 109 aa16.79■□□□□ 0.28
UPF3A-201ENST00000351487 SPANXN1Q5VSR9 72 aa16.79■□□□□ 0.28
UPF3A-201ENST00000351487 Q6ZS46 218 aa16.79■□□□□ 0.28
UPF3A-201ENST00000351487 BOD1L2Q8IYS8 172 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 H3BVH4 76 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 FAM19A4Q96LR4 140 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 UFC1Q9Y3C8 167 aa16.78■□□□□ 0.28
UPF3A-201ENST00000351487 TRAV21A0A0B4J279 112 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 TMEM8BA6NDV4 472 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 TAX1BP3O14907 124 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 UBE2V1Q13404 147 aa16.77■□□□□ 0.28
UPF3A-201ENST00000351487 PIEZO1Q92508 2521 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 CCL25O15444 150 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 AVPP01185 164 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 GATA3P23771 443 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 APRG1Q8IVJ8 170 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 C18orf15Q96N68 181 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 CFAP46Q8IYW2 2715 aa16.77■□□□□ 0.27
UPF3A-201ENST00000351487 TRBV7-9A0A0J9YWB2 115 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 WFDC3Q8IUB2 231 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 SPOCK3Q9BQ16 436 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 DKK2Q9UBU2 259 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.76■□□□□ 0.272e-8■■■■□ 23.5
UPF3A-201ENST00000351487 PTTG1IPP53801 180 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 TMEM158Q8WZ71 300 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 MRAP2Q96G30 205 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 RHPN1-AS1Q9BWJ2 59 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 ZMAT4Q9H898 229 aa16.76■□□□□ 0.27
UPF3A-201ENST00000351487 DAZ1Q9NQZ3 744 aaKnown RBP16.76■□□□□ 0.27
UPF3A-201ENST00000351487 ZFHX3Q15911 3703 aa16.75■□□□□ 0.27
UPF3A-201ENST00000351487 DSCR9P59020 149 aa16.75■□□□□ 0.27
UPF3A-201ENST00000351487 ODF1Q14990 250 aa16.75■□□□□ 0.27
UPF3A-201ENST00000351487 CD5LO43866 347 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms