RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 HLA-DMBP28068 263 aa14.01□□□□□ -0.17
KRCC1-201ENST00000347055 LYRM7Q5U5X0 104 aa14.01□□□□□ -0.17
KRCC1-201ENST00000347055 SELENOKQ9Y6D0 94 aa14.01□□□□□ -0.17
KRCC1-201ENST00000347055 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
KRCC1-201ENST00000347055 CENPVL3A0A0U1RRI6 287 aa14□□□□□ -0.17
KRCC1-201ENST00000347055 ERCC8Q13216 396 aa14□□□□□ -0.17
KRCC1-201ENST00000347055 MTURNQ8N3F0 131 aa14□□□□□ -0.17
KRCC1-201ENST00000347055 TOMM6Q96B49 74 aa14□□□□□ -0.17
KRCC1-201ENST00000347055 SPAG8Q99932 426 aaPredicted RBP14□□□□□ -0.17
KRCC1-201ENST00000347055 ZGRF1Q86YA3 2104 aa14□□□□□ -0.17
KRCC1-201ENST00000347055 H3BMG7 143 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 M0R381 172 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 PRB4P10163 310 aaPredicted RBP13.99□□□□□ -0.17
KRCC1-201ENST00000347055 CLEC2AQ6UVW9 174 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 TIMD4Q96H15 378 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 VCX2Q9H322 139 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 CELSR3Q9NYQ7 3312 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.99□□□□□ -0.17
KRCC1-201ENST00000347055 PRAC2D3DTV9 90 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 PPP1R17O96001 155 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 TRGV3P03979 118 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 SMAGPQ0VAQ4 97 aa13.99□□□□□ -0.17
KRCC1-201ENST00000347055 HOXA3O43365 443 aaPredicted RBP13.98□□□□□ -0.17
KRCC1-201ENST00000347055 MED14OSP0DP75 135 aa13.98□□□□□ -0.17
KRCC1-201ENST00000347055 NEXN-AS1Q8NBZ9 246 aa13.98□□□□□ -0.17
KRCC1-201ENST00000347055 ETDBQ3ZM63 59 aa13.97□□□□□ -0.17
KRCC1-201ENST00000347055 SPANXN1Q5VSR9 72 aa13.97□□□□□ -0.17
KRCC1-201ENST00000347055 C11orf21Q9P2W6 132 aa13.97□□□□□ -0.17
KRCC1-201ENST00000347055 IGHV7-81A0A0B4J1V7 117 aa13.96□□□□□ -0.17
KRCC1-201ENST00000347055 LYNX1G3V0Z9 82 aa13.96□□□□□ -0.17
KRCC1-201ENST00000347055 LYNX1P0DP58 116 aa13.96□□□□□ -0.17
KRCC1-201ENST00000347055 IGFL4Q6B9Z1 124 aa13.96□□□□□ -0.17
KRCC1-201ENST00000347055 DLX4Q92988 240 aaPredicted RBP13.96□□□□□ -0.17
KRCC1-201ENST00000347055 C1QTNF4Q9BXJ3 329 aa13.96□□□□□ -0.17
KRCC1-201ENST00000347055 DSPP15924 2871 aaKnown RBP13.96□□□□□ -0.17
KRCC1-201ENST00000347055 VMO1Q7Z5L0 202 aa13.96□□□□□ -0.18
KRCC1-201ENST00000347055 SCGB3A1Q96QR1 104 aa13.96□□□□□ -0.18
KRCC1-201ENST00000347055 UFC1Q9Y3C8 167 aa13.96□□□□□ -0.18
KRCC1-201ENST00000347055 IGHV3-23P01764 117 aa13.95□□□□□ -0.18
KRCC1-201ENST00000347055 PPIFP30405 207 aaKnown RBP13.95□□□□□ -0.18
KRCC1-201ENST00000347055 PAPPA-AS1Q5QFB9 102 aa13.95□□□□□ -0.18
KRCC1-201ENST00000347055 RAXQ9Y2V3 346 aa13.95□□□□□ -0.18
KRCC1-201ENST00000347055 U3KQE9 123 aa13.95□□□□□ -0.18
KRCC1-201ENST00000347055 TRAV8-2A0A0B4J237 113 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 LGALS1P09382 135 aaKnown RBP13.94□□□□□ -0.18
KRCC1-201ENST00000347055 SUMO2P61956 95 aaKnown RBP13.94□□□□□ -0.18
KRCC1-201ENST00000347055 KLRD1Q13241 179 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 MORN3Q6PF18 240 aaPredicted RBP13.94□□□□□ -0.18
KRCC1-201ENST00000347055 METTL26Q96S19 204 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 SVILO95425 2214 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 APOMO95445 188 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 UBE2D1P51668 147 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 RPL32P62910 135 aaKnown RBP13.94□□□□□ -0.18
KRCC1-201ENST00000347055 C15orf32Q32M92 178 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
KRCC1-201ENST00000347055 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 EFNA4P52798 201 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 FBXL19-AS1Q494R0 122 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 C9orf139Q6ZV77 190 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 SH2D6Q7Z4S9 175 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 EEF1AKMT3Q96AZ1 226 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 VKORC1Q9BQB6 163 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 DPH3P1Q9H4G8 78 aa13.93□□□□□ -0.18
KRCC1-201ENST00000347055 IGHV1-69DA0A0B4J2H0 117 aa13.92□□□□□ -0.18
KRCC1-201ENST00000347055 TNRC18O15417 2968 aaPredicted RBP13.92□□□□□ -0.18
KRCC1-201ENST00000347055 FOXI1Q12951 378 aa13.92□□□□□ -0.18
KRCC1-201ENST00000347055 C8orf86Q6ZUL3 223 aa13.92□□□□□ -0.18
KRCC1-201ENST00000347055 RNF182Q8N6D2 247 aa13.92□□□□□ -0.18
KRCC1-201ENST00000347055 Q8N9W7 124 aa13.92□□□□□ -0.18
KRCC1-201ENST00000347055 POM121L12Q8N7R1 296 aa13.91□□□□□ -0.18
KRCC1-201ENST00000347055 Q8NA96 180 aa13.91□□□□□ -0.18
KRCC1-201ENST00000347055 LINC00477Q96M19 166 aa13.91□□□□□ -0.18
KRCC1-201ENST00000347055 SPOCK3Q9BQ16 436 aa13.91□□□□□ -0.18
KRCC1-201ENST00000347055 MRPL16Q9NX20 251 aaKnown RBP13.91□□□□□ -0.18
KRCC1-201ENST00000347055 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
KRCC1-201ENST00000347055 CYSLTR1Q9Y271 337 aa13.91□□□□□ -0.18
KRCC1-201ENST00000347055 TRAV26-2A0A0B4J265 109 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 TRBV7-9A0A0J9YWB2 115 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 CLEC3BP05452 202 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 UBE2D3P61077 147 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 UBE2D2P62837 147 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 SCGB2A2Q13296 93 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 AMTNQ6UX39 209 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 BAALCQ8WXS3 180 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 PRADC1Q9BSG0 188 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
KRCC1-201ENST00000347055 PRRC2CQ9Y520 2896 aaKnown RBP13.9□□□□□ -0.19
KRCC1-201ENST00000347055 TRBV20-1A0A075B6N2 111 aa13.89□□□□□ -0.19
KRCC1-201ENST00000347055 TRAV21A0A0B4J279 112 aa13.89□□□□□ -0.19
KRCC1-201ENST00000347055 COX6B1P14854 86 aa13.89□□□□□ -0.19
KRCC1-201ENST00000347055 HERVK_113P61574 105 aa13.89□□□□□ -0.19
KRCC1-201ENST00000347055 CKS1BP61024 79 aa13.88□□□□□ -0.19
KRCC1-201ENST00000347055 RASL10AQ92737 203 aa13.88□□□□□ -0.19
KRCC1-201ENST00000347055 SH3BGRL2Q9UJC5 107 aa13.88□□□□□ -0.19
KRCC1-201ENST00000347055 NCOR1O75376 2440 aa13.88□□□□□ -0.19
KRCC1-201ENST00000347055 ZNF815PA8K554 130 aa13.88□□□□□ -0.19
KRCC1-201ENST00000347055 H3BVH4 76 aa13.88□□□□□ -0.19
KRCC1-201ENST00000347055 C2orf66Q6UXQ4 117 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms