RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LSM4Q9Y4Z0 139 aaKnown RBP8.63□□□□□ -1.03
CLCN6-202ENST00000346436 MED12LQ86YW9 2145 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 K7ERU9 68 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 UBE2BP63146 152 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 CHD3Q12873 2000 aaKnown RBP8.63□□□□□ -1.03
CLCN6-202ENST00000346436 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 INAFM1C9JVW0 142 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
CLCN6-202ENST00000346436 GAGE1Q13065 139 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 GAGE4Q13068 117 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 GAGE5Q13069 117 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
CLCN6-202ENST00000346436 IGHV1OR15-1A0A075B7D0 117 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 TYMSP04818 313 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 FABP2P12104 132 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 WT1-ASQ06250 92 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 RHOHQ15669 191 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
CLCN6-202ENST00000346436 IGF2BP2-AS1Q96M15 143 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 IGKV2D-24A0A075B6R9 120 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 CFHR3Q02985 330 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
CLCN6-202ENST00000346436 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 FOXI2Q6ZQN5 318 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 C1orf43Q9BWL3 253 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 TRAV25A0A0B4J276 109 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 FNDC10F2Z333 226 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 FRMD6-AS1P0C7T7 363 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
CLCN6-202ENST00000346436 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 TDRG1Q3Y452 100 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 C18orf32Q8TCD1 76 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 ZGRF1Q86YA3 2104 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 A0A087X0K7 114 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 PLP1P60201 277 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 ZNF493Q6ZR52 646 aa8.62□□□□□ -1.03
CLCN6-202ENST00000346436 D6R8Y8 96 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 H3BUT2 72 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 NDUFA4L2Q9NRX3 87 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
CLCN6-202ENST00000346436 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 INS-IGF2F8WCM5 200 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 RNF152Q8N8N0 203 aa8.61□□□□□ -1.03
CLCN6-202ENST00000346436 BDP1A6H8Y1 2624 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 NPSP0C0P6 89 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 C8orf31Q8N9H6 132 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 WIPF2Q8TF74 440 aaPredicted RBP8.6□□□□□ -1.03
CLCN6-202ENST00000346436 SPATA25Q9BR10 227 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 CSTL1Q9H114 145 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 NDUFA3O95167 84 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 IGHV4-38-2P0DP08 117 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 Q0VG73 95 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 UTF1Q5T230 341 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 ACACBO00763 2458 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 PLCE1Q9P212 2302 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 MORN5Q5VZ52 161 aa8.6□□□□□ -1.03
CLCN6-202ENST00000346436 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 MALRD1Q5VYJ5 2156 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 ARMS2P0C7Q2 107 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 RPL32P62910 135 aaKnown RBP8.59□□□□□ -1.03
CLCN6-202ENST00000346436 Q6ZVH6 145 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 OR11H6Q8NGC7 330 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 SFTA2Q6UW10 78 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 DNAJC9-AS1A6NH13 148 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 HILS1P60008 231 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 OR2K2Q8NGT1 345 aa8.59□□□□□ -1.03
CLCN6-202ENST00000346436 KNCNA6PVL3 124 aa8.59□□□□□ -1.04
CLCN6-202ENST00000346436 CD300EQ496F6 205 aaPredicted RBP8.59□□□□□ -1.04
CLCN6-202ENST00000346436 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 PRR20EP86478 221 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 PRR20CP86479 221 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 PRR20DP86480 221 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 PRR20BP86481 221 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 PRR20AP86496 221 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
CLCN6-202ENST00000346436 A0A0C4DFX4 3053 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 CRLF1O75462 422 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 AMN1Q8IY45 258 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 SRSF2Q01130 221 aaKnown RBP8.58□□□□□ -1.04
CLCN6-202ENST00000346436 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 C16orf74Q96GX8 76 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms