RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 C11orf68Q9H3H3 251 aaKnown RBP12.36□□□□□ -0.43
SRPK1-201ENST00000346162 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
SRPK1-201ENST00000346162 PRR14LQ5THK1 2151 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 UBE2L6O14933 153 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 NPFFO15130 113 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 C11orf53Q8IXP5 236 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 DYSFO75923 2080 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 MORN5Q5VZ52 161 aa12.35□□□□□ -0.43
SRPK1-201ENST00000346162 LOXP28300 417 aaPredicted RBP12.34□□□□□ -0.43
SRPK1-201ENST00000346162 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 PRSS46E5RG02 174 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 J3KT08 172 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
SRPK1-201ENST00000346162 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
SRPK1-201ENST00000346162 PTH2Q96A98 100 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 PCNX3Q9H6A9 2034 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 POU2AF1Q16633 256 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 F8VRH5 84 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 PRR20EP86478 221 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 PRR20CP86479 221 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 PRR20DP86480 221 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 PRR20BP86481 221 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 PRR20AP86496 221 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 ANKRD29Q8N6D5 301 aa12.33□□□□□ -0.44
SRPK1-201ENST00000346162 CNTFRP26992 372 aa12.32□□□□□ -0.44
SRPK1-201ENST00000346162 HLA-DMBP28068 263 aa12.32□□□□□ -0.44
SRPK1-201ENST00000346162 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
SRPK1-201ENST00000346162 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
SRPK1-201ENST00000346162 GNLYP22749 145 aa12.32□□□□□ -0.44
SRPK1-201ENST00000346162 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
SRPK1-201ENST00000346162 C11orf1Q9H5F2 150 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 WT1-ASQ06250 92 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 BRD3OSQ6XYD6 125 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 Q8N8P6 123 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 SPANXCQ9NY87 97 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 LTAP01374 205 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 SIGLEC15Q6ZMC9 328 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 CITED2Q99967 270 aaPredicted RBP12.31□□□□□ -0.44
SRPK1-201ENST00000346162 SPRY4Q9C004 299 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 RNF114Q9Y508 228 aa12.31□□□□□ -0.44
SRPK1-201ENST00000346162 PDE6HQ13956 83 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 LINC00311Q8N616 119 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 HIGD1BQ9P298 99 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
SRPK1-201ENST00000346162 FAM120AOSQ5T036 256 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 IGFL2Q6UWQ7 119 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 A0A1W2PNU3 283 aaPredicted RBP12.3□□□□□ -0.44
SRPK1-201ENST00000346162 CD7P09564 240 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 RBMY1BA6NDE4 496 aaKnown RBP12.3□□□□□ -0.44
SRPK1-201ENST00000346162 RBMY1EA6NEQ0 496 aaKnown RBP12.3□□□□□ -0.44
SRPK1-201ENST00000346162 RBMY1DP0C7P1 496 aaKnown RBP12.3□□□□□ -0.44
SRPK1-201ENST00000346162 RBMY1A1P0DJD3 496 aaKnown RBP12.3□□□□□ -0.44
SRPK1-201ENST00000346162 RBMY1CP0DJD4 496 aa12.3□□□□□ -0.44
SRPK1-201ENST00000346162 PLA2G5P39877 138 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 NOTCH2Q04721 2471 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 H3BUX3 64 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 C2orf66Q6UXQ4 117 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 SHANK2-AS3Q9BTD1 123 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 SAA4P35542 130 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 NDUFV3P56181 108 aaKnown RBP12.29□□□□□ -0.44
SRPK1-201ENST00000346162 ITLN2Q8WWU7 325 aaPredicted RBP12.29□□□□□ -0.44
SRPK1-201ENST00000346162 DKK4Q9UBT3 224 aa12.29□□□□□ -0.44
SRPK1-201ENST00000346162 FAM236AA0A1B0GUQ0 79 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 FAM236BA0A1B0GV22 79 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 IGFL4Q6B9Z1 124 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 CENPFP49454 3210 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 OVOL1O14753 267 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 CD28P10747 220 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 SRD5A1P18405 259 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 CARD19Q96LW7 228 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 DIAPH2-AS1Q14236 149 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 TPSG1Q9NRR2 321 aa12.28□□□□□ -0.44
SRPK1-201ENST00000346162 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 VCYO14598 125 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 ATP6V0E2Q8NHE4 81 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 GTSF1Q8WW33 167 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 DUX3Q96PT4 197 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 KIAA1549LQ6ZVL6 1849 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.44
SRPK1-201ENST00000346162 TOMM7Q9P0U1 55 aa12.27□□□□□ -0.44
SRPK1-201ENST00000346162 C5orf47Q569G3 176 aa12.27□□□□□ -0.45
SRPK1-201ENST00000346162 K7EM74 188 aa12.27□□□□□ -0.45
SRPK1-201ENST00000346162 NDPQ00604 133 aa12.27□□□□□ -0.45
SRPK1-201ENST00000346162 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 INAFM2P0DMQ5 153 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 IL17RELQ6ZVW7 336 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 FXYD5Q96DB9 178 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 C8orf49Q96NF6 230 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 ALPK3Q96L96 1907 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 A0A087WX48 190 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 TRBV7-1A0A0A6YYK4 115 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms