RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 H0YGX0 51 aa15.66■□□□□ 0.1
HDAC4-201ENST00000345617 NBL1P41271 181 aa15.65■□□□□ 0.1
HDAC4-201ENST00000345617 GGNQ86UU5 652 aa15.65■□□□□ 0.1
HDAC4-201ENST00000345617 RNF152Q8N8N0 203 aa15.65■□□□□ 0.1
HDAC4-201ENST00000345617 PDE6GP18545 87 aa15.65■□□□□ 0.1
HDAC4-201ENST00000345617 CFHR4Q92496 578 aa15.65■□□□□ 0.1
HDAC4-201ENST00000345617 SELENOKQ9Y6D0 94 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 TMEM243Q9BU79 118 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 TRBV19A0A075B6N1 114 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 ATP6V0E2Q8NHE4 81 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 CRYBA4P53673 196 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 TEN1Q86WV5 123 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 A0A087WV48 116 aa15.64■□□□□ 0.09
HDAC4-201ENST00000345617 LENEPQ9Y5L5 61 aa15.63■□□□□ 0.09
HDAC4-201ENST00000345617 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
HDAC4-201ENST00000345617 PSPNO60542 156 aa15.63■□□□□ 0.09
HDAC4-201ENST00000345617 MST1LQ2TV78 715 aa15.63■□□□□ 0.09
HDAC4-201ENST00000345617 PRSS57Q6UWY2 283 aa15.63■□□□□ 0.09
HDAC4-201ENST00000345617 EFNA4P52798 201 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 SCRT2Q9NQ03 307 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 TRAV3A0A0B4J244 114 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 ZNF134P52741 427 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 CD177Q8N6Q3 437 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 DEFB125Q8N687 156 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 C11orf52Q96A22 123 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 RHPN1-AS1Q9BWJ2 59 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 FGFBP3Q8TAT2 258 aa15.62■□□□□ 0.09
HDAC4-201ENST00000345617 B5MCH6 92 aa15.61■□□□□ 0.09
HDAC4-201ENST00000345617 C12orf74Q32Q52 190 aa15.61■□□□□ 0.09
HDAC4-201ENST00000345617 B4DSR2 109 aa15.61■□□□□ 0.09
HDAC4-201ENST00000345617 RBAKDNA6NC62 111 aa15.61■□□□□ 0.09
HDAC4-201ENST00000345617 MRPL35Q9NZE8 188 aaKnown RBP15.61■□□□□ 0.09
HDAC4-201ENST00000345617 CD24P25063 80 aa15.61■□□□□ 0.09
HDAC4-201ENST00000345617 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 NDPQ00604 133 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 CSRP2Q16527 193 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 SPRR3Q9UBC9 169 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-201ENST00000345617 A0A1W2PPI3 338 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 FOXI2Q6ZQN5 318 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 K7ERJ3 54 aa15.6■□□□□ 0.09
HDAC4-201ENST00000345617 RSPO4Q2I0M5 234 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-201ENST00000345617 COL4A1P02462 1669 aa15.59■□□□□ 0.09
HDAC4-201ENST00000345617 GATA4P43694 442 aa15.59■□□□□ 0.09
HDAC4-201ENST00000345617 ATP1A1-AS1Q5TC04 95 aa15.59■□□□□ 0.09
HDAC4-201ENST00000345617 PIP4P2Q8N4L2 257 aa15.59■□□□□ 0.09
HDAC4-201ENST00000345617 PRR25Q96S07 402 aa15.58■□□□□ 0.09
HDAC4-201ENST00000345617 IGHV1-69DA0A0B4J2H0 117 aa15.58■□□□□ 0.08
HDAC4-201ENST00000345617 IGKV1-16P04430 117 aa15.58■□□□□ 0.08
HDAC4-201ENST00000345617 A0A0B4J2C4 111 aa15.58■□□□□ 0.08
HDAC4-201ENST00000345617 C10orf55Q5SWW7 151 aa15.58■□□□□ 0.08
HDAC4-201ENST00000345617 LTAP01374 205 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 CYYR1Q96J86 154 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 GAFA1Q96PS6 74 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 PAX9P55771 341 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 FLVCR1-AS1Q8TAF5 88 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 TRAV25A0A0B4J276 109 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 PRDM6Q9NQX0 595 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 JMJD7-PLA2G4BH0Y9G9 81 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 CFC1BP0CG36 223 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 CFC1P0CG37 223 aa15.57■□□□□ 0.08
HDAC4-201ENST00000345617 ATP5EP56381 51 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-201ENST00000345617 COA6Q5JTJ3 125 aaKnown RBP15.57■□□□□ 0.08
HDAC4-201ENST00000345617 C8orf49Q96NF6 230 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 ZNF672Q499Z4 452 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-201ENST00000345617 CHKB-CPT1BH3BT56 60 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 LYPD6BQ8NI32 183 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 APOC4P55056 127 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 SS18L2Q9UHA2 77 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 HIGD1BQ9P298 99 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 ZNF833PQ6ZTB9 187 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 SH2D6Q7Z4S9 175 aa15.56■□□□□ 0.08
HDAC4-201ENST00000345617 TMEM213A2RRL7 107 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 IGHV1OR15-1A0A075B7D0 117 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 E9PQ18 207 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 SLC25A29Q8N8R3 303 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 KLHL30-AS1Q8NEE0 82 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 C8orf86Q6ZUL3 223 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 LINC00479Q96M42 142 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 PFN2P35080 140 aa15.55■□□□□ 0.08
HDAC4-201ENST00000345617 BAALC-AS2P0C853 105 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 FAM110DQ8TAY7 271 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-201ENST00000345617 TMEM219Q86XT9 240 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 PTPRSQ13332 1948 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 NDUFS7O75251 213 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 IGLC7A0M8Q6 106 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 C9JQL5 133 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 LMO1P25800 156 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 IGKV1D-17A0A075B6S4 117 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 TRAV12-1A0A0B4J245 112 aa15.54■□□□□ 0.08
HDAC4-201ENST00000345617 A0A1B0GUS0 222 aa15.53■□□□□ 0.08
HDAC4-201ENST00000345617 MRPL53Q96EL3 112 aaKnown RBP15.53■□□□□ 0.08
HDAC4-201ENST00000345617 Q71RC1 249 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-201ENST00000345617 H3BRN7 92 aa15.53■□□□□ 0.08
HDAC4-201ENST00000345617 NDUFB1O75438 58 aa15.53■□□□□ 0.08
HDAC4-201ENST00000345617 MSRB2Q9Y3D2 182 aa15.52■□□□□ 0.08
HDAC4-201ENST00000345617 WFDC12Q8WWY7 111 aa15.52■□□□□ 0.08
HDAC4-201ENST00000345617 FAM236AA0A1B0GUQ0 79 aa15.52■□□□□ 0.08
HDAC4-201ENST00000345617 FAM236BA0A1B0GV22 79 aa15.52■□□□□ 0.08
HDAC4-201ENST00000345617 NDUFA4O00483 81 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms