RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 J3KRW8 73 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 PEX7O00628 323 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
SNCA-202ENST00000345009 S100A9P06702 114 aaKnown RBP8.58□□□□□ -1.04
SNCA-202ENST00000345009 TAS2R60P59551 318 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 GNG5P63218 68 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 PMS2P11Q13670 270 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 TMEM75Q8N9X5 138 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 C11orf68Q9H3H3 251 aaKnown RBP8.58□□□□□ -1.04
SNCA-202ENST00000345009 TREM1Q9NP99 234 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 A0A0J9YWU9 116 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 HTN1P15515 57 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 UBE2G1P62253 170 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 FLI1Q01543 452 aaPredicted RBP8.57□□□□□ -1.04
SNCA-202ENST00000345009 GFI1BQ5VTD9 330 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 TEX261Q6UWH6 196 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 Q8TAT8 98 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 KRTAP4-12Q9BQ66 201 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 PSG8Q9UQ74 426 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 X6R8D5 127 aa8.57□□□□□ -1.04
SNCA-202ENST00000345009 TRAV8-1A0A0A6YYK1 113 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 IGHV4-28A0A0C4DH34 117 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 PAX4O43316 350 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 CCL20P78556 96 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 PRNTQ86SH4 94 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 Q8NAQ8 132 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 EDA2RQ9HAV5 297 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 ZFP30Q9Y2G7 519 aa8.56□□□□□ -1.04
SNCA-202ENST00000345009 LOC102723971A0A1B0GUV8 181 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 RGS13O14921 159 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 PDE6DO43924 150 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 AKR1C3P42330 323 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 ATP5G3P48201 142 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 ZFAND2AQ8N6M9 145 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 C11orf45Q8TAV5 145 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 C16orf74Q96GX8 76 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 SGK494Q96LW2 274 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 VAX2Q9UIW0 290 aa8.55□□□□□ -1.04
SNCA-202ENST00000345009 TRAV21A0A0B4J279 112 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 ZNF705GA8MUZ8 300 aaPredicted RBP8.54□□□□□ -1.04
SNCA-202ENST00000345009 DEFB4AO15263 64 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 SPART-AS1P0CW21 52 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 BCL2P10415 239 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 EMP1P54849 157 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 MEF2BQ02080 365 aaPredicted RBP8.54□□□□□ -1.04
SNCA-202ENST00000345009 BTN1A1Q13410 526 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 ZNF680Q8NEM1 530 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 KLF12Q9Y4X4 402 aa8.54□□□□□ -1.04
SNCA-202ENST00000345009 TRAV34A0A0B4J273 112 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 TRBV6-1A0A0K0K1D8 114 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 CBY3A6NI87 242 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 ZNF324O75467 553 aaPredicted RBP8.53□□□□□ -1.04
SNCA-202ENST00000345009 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 RBMY1A1P0DJD3 496 aaKnown RBP8.53□□□□□ -1.04
SNCA-202ENST00000345009 RBMY1CP0DJD4 496 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 RAB14P61106 215 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 RBMY1FQ15415 496 aaKnown RBP8.53□□□□□ -1.04
SNCA-202ENST00000345009 TMEM183BQ1AE95 376 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 Q6AWC8 147 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
SNCA-202ENST00000345009 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 TMEM263Q8WUH6 116 aaKnown RBP8.53□□□□□ -1.04
SNCA-202ENST00000345009 LINC00479Q96M42 142 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 LINC00467Q9BRT7 94 aa8.53□□□□□ -1.04
SNCA-202ENST00000345009 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.05
SNCA-202ENST00000345009 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.05
SNCA-202ENST00000345009 C3orf84H3BNL1 204 aa8.52□□□□□ -1.05
SNCA-202ENST00000345009 KCNS1Q96KK3 526 aa8.52□□□□□ -1.05
SNCA-202ENST00000345009 TIMM8BQ9Y5J9 83 aaPredicted RBP8.52□□□□□ -1.05
SNCA-202ENST00000345009 RBFOX3A6NFN3 312 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 SNURFLB1AK76 121 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 GCGP01275 180 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 PFN1P07737 140 aaKnown RBP8.51□□□□□ -1.05
SNCA-202ENST00000345009 ANXA2RQ3ZCQ2 193 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 Q86TA4 180 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 C2CD4CQ8TF44 421 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 C11orf52Q96A22 123 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 EIF5A2Q9GZV4 153 aaKnown RBP8.51□□□□□ -1.05
SNCA-202ENST00000345009 MED9Q9NWA0 146 aa8.51□□□□□ -1.05
SNCA-202ENST00000345009 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 LTAP01374 205 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 AZU1P20160 251 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 PRR9Q5T870 116 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms