RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KLF14Q8TD94 323 aaPredicted RBP6.4□□□□□ -1.39
ATG4A-201ENST00000343524 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 POLQO75417 2590 aa6.4□□□□□ -1.39
ATG4A-201ENST00000343524 TANC2Q9HCD6 1990 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 H3BVH4 76 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 SLC25A20O43772 301 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 TNFRSF6BO95407 300 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 PRTN3P24158 256 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 FOLR3P41439 243 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 FXYD7P58549 80 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 IL11RAQ14626 422 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 AAMDCQ9H7C9 122 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 SEC16AO15027 2179 aa6.39□□□□□ -1.39
ATG4A-201ENST00000343524 TRBV19A0A075B6N1 114 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 SCGB2A1O75556 95 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 TCL1BO95988 128 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 LGALS1P09382 135 aaKnown RBP6.38□□□□□ -1.39
ATG4A-201ENST00000343524 CGB3P0DN86 165 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 CGB7P0DN87 165 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 SLC25A16P16260 332 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 SRSF9Q13242 221 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATG4A-201ENST00000343524 PDE6HQ13956 83 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 LAGE3Q14657 143 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 TMEM78Q5T7P6 136 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 PVRIGQ6DKI7 326 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 AJUBAQ96IF1 538 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 PROCRQ9UNN8 238 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 GON4LQ3T8J9 2241 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 NF1P21359 2839 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 CACNA1DQ01668 2161 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 IGHV3-64DA0A0J9YX35 117 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 K7EMI3 77 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 SH2D1AO60880 128 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 CEACAM4O75871 244 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 HLA-DMBP28068 263 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 RPL13AP40429 203 aaKnown RBP6.38□□□□□ -1.39
ATG4A-201ENST00000343524 ID1P41134 155 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 WT1-ASQ06250 92 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 C17orf58Q2M2W7 97 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 ALKBH6Q3KRA9 238 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 C6orf15Q6UXA7 325 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-201ENST00000343524 ZNF833PQ6ZTB9 187 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 KIR2DL4Q99706 377 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 MRPL20Q9BYC9 149 aaKnown RBP6.38□□□□□ -1.39
ATG4A-201ENST00000343524 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 NGBQ9NPG2 151 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 LRBAP50851 2863 aa6.38□□□□□ -1.39
ATG4A-201ENST00000343524 IGKV1D-17A0A075B6S4 117 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 TRAV4A0A0B4J268 109 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 FAM240AA0A1B0GVK7 77 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 IGKV1-16P04430 117 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 IGLC6P0CF74 106 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 CD40P25942 277 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 HERVK_113P61574 105 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 NDUFA11Q86Y39 141 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 LRRC75A-AS1Q8N1F1 130 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 EXOC3-AS1Q8N2X6 119 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 C10orf126Q8N4M7 172 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 DEFB119Q8N690 84 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 CSDC2Q9Y534 153 aaKnown RBP6.37□□□□□ -1.39
ATG4A-201ENST00000343524 MED12Q93074 2177 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 DYSFO75923 2080 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 KNTC1P50748 2209 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 IGHV5-10-1A0A0J9YXX1 117 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 ZNF815PA8K554 130 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 SMKR1H3BMG3 65 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 J3KT08 172 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 K7ENP7 123 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 IGHV3-13P01766 116 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 IGHG3P01860 377 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 ATP5G1P05496 136 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 LYZP61626 148 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 HOXA4Q00056 320 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-201ENST00000343524 PAPPA-AS1Q5QFB9 102 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 SIGLEC15Q6ZMC9 328 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 RASL10AQ92737 203 aa6.37□□□□□ -1.39
ATG4A-201ENST00000343524 RPUSD1Q9UJJ7 312 aaKnown RBP6.37□□□□□ -1.39
ATG4A-201ENST00000343524 UNC13CQ8NB66 2214 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 A0A1B0GX51 115 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 TFF1P04155 84 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 CD7P09564 240 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 P0DMU3 169 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 FAM231AP0DMU4 169 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 FAM231CP0DMU5 169 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 CRIP1P50238 77 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 ORMDL2Q53FV1 153 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 HES3Q5TGS1 186 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 MBNL2Q5VZF2 373 aaKnown RBP6.36□□□□□ -1.39
ATG4A-201ENST00000343524 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 SHANK2-AS3Q9BTD1 123 aa6.36□□□□□ -1.39
ATG4A-201ENST00000343524 ICE1Q9Y2F5 2266 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 PCNX1Q96RV3 2341 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 IGHV3OR15-7A0A075B7D8 119 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 TRAV2A0A0B4J234 112 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms