RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 IGF2BP2-AS1Q96M15 143 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 ZNF747Q9BV97 191 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 AGPAT4-IT1Q9H0P7 198 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 MUC22E2RYF6 1773 aaPredicted RBP5.67□□□□□ -1.5
VCAN-202ENST00000342785 A0A087WWL8 130 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 PLNP26678 52 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 TCF15Q12870 199 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 C1orf229Q6ZS94 237 aaPredicted RBP5.67□□□□□ -1.5
VCAN-202ENST00000342785 ZNF503Q96F45 646 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 GAGE12BA1L429 117 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 IGLV2-23P01705 113 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 CRYGCP07315 174 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 KLF5Q13887 457 aaPredicted RBP5.66□□□□□ -1.5
VCAN-202ENST00000342785 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 CHAC1Q9BUX1 264 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 EMP1P54849 157 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 MSMBP08118 114 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 CD28P10747 220 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 DSCR9P59020 149 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 H3BRM9 83 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 EGR2P11161 476 aaPredicted RBP5.66□□□□□ -1.5
VCAN-202ENST00000342785 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 KLF12Q9Y4X4 402 aa5.66□□□□□ -1.5
VCAN-202ENST00000342785 IGHV3-64A0A075B6Q5 118 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 TRAV2A0A0B4J234 112 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 COX8AP10176 69 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 SYNJ2BPP57105 145 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 EIF4EBP1Q13541 118 aaPredicted RBP5.65□□□□□ -1.5
VCAN-202ENST00000342785 LGALS9BQ3B8N2 356 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 LGALS9CQ6DKI2 356 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 Q8N8P6 123 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 TMEM131Q92545 1883 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 CTSGP08311 255 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 LINC00173Q6ZV60 143 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 Q6ZVH6 145 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 DYNAPQ8N1N2 210 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 TOMM7Q9P0U1 55 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 DENND4AQ7Z401 1863 aa5.65□□□□□ -1.5
VCAN-202ENST00000342785 GAGE13Q4V321 117 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 LINC00574Q9H8X3 128 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 YPEL4Q96NS1 127 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 IGHV3-73A0A0B4J1V6 119 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 IGHV7-81A0A0B4J1V7 117 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 TEX22C9J3V5 150 aa5.65□□□□□ -1.51
VCAN-202ENST00000342785 IGLV11-55A0A075B6I3 123 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 TRAV26-2A0A0B4J265 109 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 NDUFS8O00217 210 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 GTSF1Q8WW33 167 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 COPS9Q8WXC6 57 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
VCAN-202ENST00000342785 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 IGKV1D-37A0A075B6S9 117 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 RIPPLY3P57055 190 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 KIAA1549LQ6ZVL6 1849 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 ESDP10768 282 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 ANXA2RQ3ZCQ2 193 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 LCNL1Q6ZST4 164 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 MSRB1Q9NZV6 116 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 NDUFA4O00483 81 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 PF4P02776 101 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 STHQ8IWL8 128 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
VCAN-202ENST00000342785 CENPVL3A0A0U1RRI6 287 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 PKD1L2Q7Z442 2459 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 SLC25A16P16260 332 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 Q8NA96 180 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 MAPK1IP1LQ8NDC0 245 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 DKK2Q9UBU2 259 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 TMEM262E9PQX1 116 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 IGLV2-8P01709 118 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 DEFB131AP59861 70 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 OR13C6PQ8NH95 151 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 Q8N7P7 452 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 NPBQ8NG41 125 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 YAE1D1Q9NRH1 226 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 SDHAF1A6NFY7 115 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 GATA1P15976 413 aaPredicted RBP5.63□□□□□ -1.51
VCAN-202ENST00000342785 GAGE1Q13065 139 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 BVES-AS1Q5T3Y7 98 aa5.63□□□□□ -1.51
VCAN-202ENST00000342785 SPINK13Q1W4C9 94 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 PGPEP1Q9NXJ5 209 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 ADAMTS9Q9P2N4 1935 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 DOPEY1Q5JWR5 2465 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 F6UB75 175 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 TP53TG1Q9Y2A0 90 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 KNCNA6PVL3 124 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 ERG28Q9UKR5 140 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 A8MWV9 139 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 DNAL4O96015 105 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 MTORP42345 2549 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 BUB3O43684 328 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 NEGR1Q7Z3B1 354 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 CST9LQ9H4G1 147 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 HOXB4P17483 251 aaPredicted RBP5.62□□□□□ -1.51
VCAN-202ENST00000342785 OCIAD2Q56VL3 154 aa5.62□□□□□ -1.51
VCAN-202ENST00000342785 PLEKHB2Q96CS7 222 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms