RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GATA1P15976 413 aaPredicted RBP14.38□□□□□ -0.11
SMPD1-201ENST00000342245 FAM201AQ5SY85 155 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 SCGB3A1Q96QR1 104 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 SPRR3Q9UBC9 169 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 C9JAW5 83 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 ZNF672Q499Z4 452 aaPredicted RBP14.37□□□□□ -0.11
SMPD1-201ENST00000342245 FAM216BQ8N7L0 139 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 ZNF491Q8N8L2 437 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 TOMM6Q96B49 74 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 DEFB127Q9H1M4 99 aa14.37□□□□□ -0.11
SMPD1-201ENST00000342245 COL6A3P12111 3177 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 SPRY3O43610 288 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 P0DMU3 169 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 FAM231AP0DMU4 169 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 FAM231CP0DMU5 169 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 HERVK_113P61574 105 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 C15orf53Q8NAA6 179 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 ODF3Q96PU9 254 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 DSCAMO60469 2012 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 SCGB2A1O75556 95 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 CFC1BP0CG36 223 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 CFC1P0CG37 223 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 ZNF80P51504 273 aaPredicted RBP14.36□□□□□ -0.11
SMPD1-201ENST00000342245 EFNA4P52798 201 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 PAPPA-AS1Q5QFB9 102 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 ZNF575Q86XF7 245 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 Q8N1Y9 231 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 DNAJC30Q96LL9 226 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 VKORC1Q9BQB6 163 aa14.36□□□□□ -0.11
SMPD1-201ENST00000342245 WDFY4Q6ZS81 3184 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 CRYGBP07316 175 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 TEX36Q5VZQ5 186 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 TMEM105Q8N8V8 129 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 PSMG3-AS1Q96PY0 264 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 NAV3Q8IVL0 2385 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 PRR14LQ5THK1 2151 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 IGKV2-40A0A087WW87 121 aaPredicted RBP14.35□□□□□ -0.11
SMPD1-201ENST00000342245 IGKV2D-40P01614 121 aaPredicted RBP14.35□□□□□ -0.11
SMPD1-201ENST00000342245 PLEKHB2Q96CS7 222 aa14.35□□□□□ -0.11
SMPD1-201ENST00000342245 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
SMPD1-201ENST00000342245 DEFB108BQ8NET1 73 aa14.34□□□□□ -0.11
SMPD1-201ENST00000342245 CSDC2Q9Y534 153 aaKnown RBP14.34□□□□□ -0.11
SMPD1-201ENST00000342245 A0A0J9YY99 117 aa14.34□□□□□ -0.11
SMPD1-201ENST00000342245 TEX22C9J3V5 150 aa14.34□□□□□ -0.11
SMPD1-201ENST00000342245 Q6ZQT7 251 aa14.34□□□□□ -0.11
SMPD1-201ENST00000342245 LINC01587Q99440 93 aa14.34□□□□□ -0.11
SMPD1-201ENST00000342245 ENSAO43768 121 aaKnown RBP14.33□□□□□ -0.12
SMPD1-201ENST00000342245 ATXN8Q156A1 80 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 SMIM2Q9BVW6 85 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 RAI1Q7Z5J4 1906 aaPredicted RBP14.33□□□□□ -0.12
SMPD1-201ENST00000342245 TRAV2A0A0B4J234 112 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 IGHV3-30P01768 117 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 IGHV3-30-5P0DP03 117 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 RPL7P18124 248 aaKnown RBP14.33□□□□□ -0.12
SMPD1-201ENST00000342245 ERCC8Q13216 396 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 MDS2Q8NDY4 140 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 SIGLEC9Q9Y336 463 aa14.33□□□□□ -0.12
SMPD1-201ENST00000342245 GLRXP35754 106 aa14.32□□□□□ -0.12
SMPD1-201ENST00000342245 CNEP1R1Q8N9A8 125 aa14.32□□□□□ -0.12
SMPD1-201ENST00000342245 FAM57AQ8TBR7 257 aa14.32□□□□□ -0.12
SMPD1-201ENST00000342245 NTN5Q8WTR8 489 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-201ENST00000342245 TIMD4Q96H15 378 aa14.32□□□□□ -0.12
SMPD1-201ENST00000342245 SPANXCQ9NY87 97 aa14.32□□□□□ -0.12
SMPD1-201ENST00000342245 MSMPQ1L6U9 139 aa14.32□□□□□ -0.12
SMPD1-201ENST00000342245 DNAJC13O75165 2243 aa14.31□□□□□ -0.12
SMPD1-201ENST00000342245 CELSR3Q9NYQ7 3312 aa14.31□□□□□ -0.12
SMPD1-201ENST00000342245 TNFAIP6P98066 277 aaPredicted RBP14.31□□□□□ -0.12
SMPD1-201ENST00000342245 SLC25A29Q8N8R3 303 aa14.31□□□□□ -0.12
SMPD1-201ENST00000342245 FAM240AA0A1B0GVK7 77 aa14.31□□□□□ -0.12
SMPD1-201ENST00000342245 IGLV3-9A0A075B6K5 115 aa14.3□□□□□ -0.12
SMPD1-201ENST00000342245 IGHV4-4A0A075B6R2 117 aa14.3□□□□□ -0.12
SMPD1-201ENST00000342245 BAALCQ8WXS3 180 aa14.3□□□□□ -0.12
SMPD1-201ENST00000342245 SLC50A1Q9BRV3 221 aa14.3□□□□□ -0.12
SMPD1-201ENST00000342245 DUSP14O95147 198 aaKnown RBP14.3□□□□□ -0.12
SMPD1-201ENST00000342245 APELAP0DMC3 54 aa14.3□□□□□ -0.12
SMPD1-201ENST00000342245 CCL3L1P16619 93 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 ATP5J2P56134 94 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 HES1Q14469 280 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 TMEM200BQ69YZ2 307 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 ZNF474Q6S9Z5 364 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-201ENST00000342245 H3BMM0 161 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 LGALS9O00182 355 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 CD59P13987 128 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 Q8TAT8 98 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 UBE2WQ96B02 151 aa14.29□□□□□ -0.12
SMPD1-201ENST00000342245 TRBV7-7A0A0K0K1E9 115 aa14.28□□□□□ -0.12
SMPD1-201ENST00000342245 TRBV10-2A0A0K0K1G8 114 aa14.28□□□□□ -0.12
SMPD1-201ENST00000342245 K7EIM0 57 aa14.28□□□□□ -0.12
SMPD1-201ENST00000342245 TIMM23O14925 209 aa14.28□□□□□ -0.12
SMPD1-201ENST00000342245 LINC01620Q4KN68 170 aa14.28□□□□□ -0.12
SMPD1-201ENST00000342245 C1orf210Q8IVY1 113 aa14.28□□□□□ -0.12
SMPD1-201ENST00000342245 A0A0B4J2C4 111 aa14.27□□□□□ -0.12
SMPD1-201ENST00000342245 WIPF1O43516 503 aa14.27□□□□□ -0.12
SMPD1-201ENST00000342245 TGFAP01135 160 aa14.27□□□□□ -0.12
SMPD1-201ENST00000342245 SLC25A15Q9Y619 301 aa14.27□□□□□ -0.13
SMPD1-201ENST00000342245 RBAKDNA6NC62 111 aa14.26□□□□□ -0.13
SMPD1-201ENST00000342245 TRGV3P03979 118 aa14.26□□□□□ -0.13
SMPD1-201ENST00000342245 FOXC1Q12948 553 aa14.26□□□□□ -0.13
SMPD1-201ENST00000342245 C21orf62Q9NYP8 219 aa14.26□□□□□ -0.13
SMPD1-201ENST00000342245 IGHV3-33P01772 117 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms