RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TRAV8-2A0A0B4J237 113 aa11.5□□□□□ -0.57
TPM3-208ENST00000341485 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
TPM3-208ENST00000341485 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
TPM3-208ENST00000341485 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
TPM3-208ENST00000341485 IGF1P05019 195 aa11.49□□□□□ -0.57
TPM3-208ENST00000341485 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
TPM3-208ENST00000341485 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
TPM3-208ENST00000341485 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
TPM3-208ENST00000341485 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 FABP5P3A8MUU1 101 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 ORM1P02763 201 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 TSPOP30536 169 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 MRPL51Q4U2R6 128 aaKnown RBP11.48□□□□□ -0.57
TPM3-208ENST00000341485 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 PRELID3AQ96N28 172 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 MAP1LC3CQ9BXW4 147 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 HSPB8Q9UJY1 196 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 ZFHX3Q15911 3703 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 HOXA3O43365 443 aaPredicted RBP11.48□□□□□ -0.57
TPM3-208ENST00000341485 IFI27P40305 119 aaPredicted RBP11.48□□□□□ -0.57
TPM3-208ENST00000341485 FAM106AQ4KMX7 169 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 PET117Q6UWS5 81 aa11.48□□□□□ -0.57
TPM3-208ENST00000341485 TIMM8BQ9Y5J9 83 aaPredicted RBP11.48□□□□□ -0.57
TPM3-208ENST00000341485 CD5LO43866 347 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 TRGV3P03979 118 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 G0S2P27469 103 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 TWIST1Q15672 202 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 Q6ZS46 218 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 C8orf86Q6ZUL3 223 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 ATP6V0BQ99437 205 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 MCRIP2Q9BUT9 160 aaKnown RBP11.47□□□□□ -0.57
TPM3-208ENST00000341485 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 SIGLEC8Q9NYZ4 499 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 LOC389332A0A1B0GUA5 103 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 ORMDL3Q8N138 153 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
TPM3-208ENST00000341485 A0A096LNJ9 63 aa11.46□□□□□ -0.57
TPM3-208ENST00000341485 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
TPM3-208ENST00000341485 OR10AG1Q8NH19 301 aa11.46□□□□□ -0.57
TPM3-208ENST00000341485 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.57
TPM3-208ENST00000341485 ZNF747Q9BV97 191 aa11.46□□□□□ -0.57
TPM3-208ENST00000341485 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.57
TPM3-208ENST00000341485 MRPS16Q9Y3D3 137 aaKnown RBP11.46□□□□□ -0.57
TPM3-208ENST00000341485 CSPG4Q6UVK1 2322 aa11.46□□□□□ -0.58
TPM3-208ENST00000341485 H0Y8G0 127 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 ZNF25P17030 456 aaPredicted RBP11.45□□□□□ -0.58
TPM3-208ENST00000341485 ARL3P36405 182 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 CNFNQ9BYD5 112 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 TFPI2P48307 235 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 STPG4Q8N801 248 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 ST20Q9HBF5 79 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 C11orf21Q9P2W6 132 aa11.45□□□□□ -0.58
TPM3-208ENST00000341485 H3BUA1 57 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 KRTAP1-1Q07627 177 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 LINC01545Q5VT33 79 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 RNF185Q96GF1 192 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 NCR2O95944 276 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 NPYP01303 97 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 PF4V1P10720 104 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
TPM3-208ENST00000341485 CKS2P33552 79 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 UNQ9165/PRO28630Q6UXU0 137 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 NPFFR1Q9GZQ6 430 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 TP73-AS1Q9UF72 201 aa11.44□□□□□ -0.58
TPM3-208ENST00000341485 MAP1AP78559 2803 aaPredicted RBP11.43□□□□□ -0.58
TPM3-208ENST00000341485 GCN1Q92616 2671 aaKnown RBP11.43□□□□□ -0.58
TPM3-208ENST00000341485 HIST1H1AQ02539 215 aaPredicted RBP11.43□□□□□ -0.58
TPM3-208ENST00000341485 TMEM95Q3KNT9 176 aa11.43□□□□□ -0.58
TPM3-208ENST00000341485 TMEM78Q5T7P6 136 aa11.43□□□□□ -0.58
TPM3-208ENST00000341485 C9orf47Q6ZRZ4 202 aa11.43□□□□□ -0.58
TPM3-208ENST00000341485 CREBBPQ92793 2442 aa11.43□□□□□ -0.58
TPM3-208ENST00000341485 PDZD2O15018 2839 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 C16orf92Q96LL3 132 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 C20orf173Q96LM9 149 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 DUX5Q96PT3 197 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 CELSR1Q9NYQ6 3014 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
TPM3-208ENST00000341485 TMEM208Q9BTX3 173 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 ZNF580Q9UK33 172 aa11.42□□□□□ -0.58
TPM3-208ENST00000341485 NDUFA4O00483 81 aa11.41□□□□□ -0.58
TPM3-208ENST00000341485 BRI3O95415 125 aa11.41□□□□□ -0.58
TPM3-208ENST00000341485 GPHB5Q86YW7 130 aa11.41□□□□□ -0.58
TPM3-208ENST00000341485 USMG5Q96IX5 58 aa11.41□□□□□ -0.58
TPM3-208ENST00000341485 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
TPM3-208ENST00000341485 GAS8-AS1O95177 125 aa11.4□□□□□ -0.58
TPM3-208ENST00000341485 IGHV3-11P01762 117 aa11.4□□□□□ -0.58
TPM3-208ENST00000341485 FXYD7P58549 80 aa11.4□□□□□ -0.58
TPM3-208ENST00000341485 Q6ZQT7 251 aa11.4□□□□□ -0.58
TPM3-208ENST00000341485 PPP1R14DQ9NXH3 145 aa11.4□□□□□ -0.58
TPM3-208ENST00000341485 HSBP1L1C9JCN9 74 aa11.4□□□□□ -0.58
TPM3-208ENST00000341485 FOXE3Q13461 319 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms