RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PRAC2D3DTV9 90 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 NDUFB4O95168 129 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 PYYP10082 97 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 TMEM263Q8WUH6 116 aaKnown RBP9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
SIRPB3P-201ENST00000340424 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 NBEAP1P0C6P0 100 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 CT45A10P0DMU9 189 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 TAS2R45P59539 299 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 RXFP4Q8TDU9 374 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 FRAS1Q86XX4 4008 aa9.47□□□□□ -0.89
SIRPB3P-201ENST00000340424 TRAV1-1A0A0B4J248 108 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 M0R3E3 92 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 SLC25A5P05141 298 aaKnown RBP9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 S100A12P80511 92 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 KHDC3LQ587J8 217 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 FFAR4Q5NUL3 377 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 PYGO2Q9BRQ0 406 aa9.46□□□□□ -0.9
SIRPB3P-201ENST00000340424 OR7C2O60412 319 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 HTN1P15515 57 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 AZU1P20160 251 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 RAB5BP61020 215 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 ICAM4Q14773 271 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 TMEM78Q5T7P6 136 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 C9orf47Q6ZRZ4 202 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 POM121L12Q8N7R1 296 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 C15orf53Q8NAA6 179 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
SIRPB3P-201ENST00000340424 TRBV7-9A0A0J9YWB2 115 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 CBY3A6NI87 242 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 KLLNB2CW77 178 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 NDUFS6O75380 124 aaKnown RBP9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 HTN3P15516 51 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 CRISP2P16562 243 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 ATP6V0CP27449 155 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 CSN1S1P47710 185 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 PPT1P50897 306 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 ACOT6Q3I5F7 207 aaPredicted RBP9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
SIRPB3P-201ENST00000340424 A0A087WWC5 75 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 C7orf71A4D174 169 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 PRM2P04554 102 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 ATP5G1P05496 136 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 OR10J4P0C629 311 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 ATP5G3P48201 142 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 KIR3DS1Q14943 382 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 SFT2D1Q8WV19 159 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 LINC00467Q9BRT7 94 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 SH3BGRL3Q9H299 93 aa9.43□□□□□ -0.9
SIRPB3P-201ENST00000340424 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 C1orf196B1AJZ1 125 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 S100A8P05109 93 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 ERCC8Q13216 396 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 OR2G3Q8NGZ4 309 aa9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 PSMG3Q9BT73 122 aaPredicted RBP9.42□□□□□ -0.9
SIRPB3P-201ENST00000340424 A0A1W2PPV4 95 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 C5orf52A6NGY3 159 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 J3KRW8 73 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 GPX1P07203 203 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 SMIM6P0DI80 62 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 ZNF138P52744 262 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 RANP62826 216 aaKnown RBP9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 CTAG1AP78358 180 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 ANXA2RQ3ZCQ2 193 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 ARL6IP6Q8N6S5 226 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 LINC00612Q8N6U2 182 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 FAM213BQ8TBF2 198 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms