RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
RET-201ENST00000340058 NHP2Q9NX24 153 aaKnown RBP11.55□□□□□ -0.56
RET-201ENST00000340058 PDE6HQ13956 83 aa11.54□□□□□ -0.56
RET-201ENST00000340058 HOXA3O43365 443 aaPredicted RBP11.54□□□□□ -0.56
RET-201ENST00000340058 IGLV2-23P01705 113 aa11.54□□□□□ -0.56
RET-201ENST00000340058 TYMSP04818 313 aa11.54□□□□□ -0.56
RET-201ENST00000340058 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
RET-201ENST00000340058 FAM223BA6NKX1 122 aa11.54□□□□□ -0.56
RET-201ENST00000340058 H3BUT2 72 aa11.54□□□□□ -0.56
RET-201ENST00000340058 DUSP14O95147 198 aaKnown RBP11.54□□□□□ -0.56
RET-201ENST00000340058 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
RET-201ENST00000340058 FAM223AQ8IWN6 122 aa11.54□□□□□ -0.56
RET-201ENST00000340058 TTC9CQ8N5M4 171 aa11.54□□□□□ -0.56
RET-201ENST00000340058 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
RET-201ENST00000340058 KMT2EQ8IZD2 1858 aa11.54□□□□□ -0.56
RET-201ENST00000340058 LINC01548A6NM66 108 aa11.54□□□□□ -0.56
RET-201ENST00000340058 SYS1-DBNDD2H3BUS1 97 aa11.54□□□□□ -0.56
RET-201ENST00000340058 I3L2K1 104 aa11.54□□□□□ -0.56
RET-201ENST00000340058 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
RET-201ENST00000340058 MAP1AP78559 2803 aaPredicted RBP11.53□□□□□ -0.56
RET-201ENST00000340058 H7C1H1 209 aa11.53□□□□□ -0.56
RET-201ENST00000340058 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
RET-201ENST00000340058 CBY1Q9Y3M2 126 aa11.53□□□□□ -0.56
RET-201ENST00000340058 CELSR3Q9NYQ7 3312 aa11.53□□□□□ -0.56
RET-201ENST00000340058 RPL13AP40429 203 aaKnown RBP11.53□□□□□ -0.56
RET-201ENST00000340058 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
RET-201ENST00000340058 PET117Q6UWS5 81 aa11.53□□□□□ -0.56
RET-201ENST00000340058 PHLDA1Q8WV24 401 aaPredicted RBP11.53□□□□□ -0.56
RET-201ENST00000340058 VCX2Q9H322 139 aa11.53□□□□□ -0.56
RET-201ENST00000340058 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
RET-201ENST00000340058 TRGV1A0A0A0MS02 117 aa11.53□□□□□ -0.56
RET-201ENST00000340058 EREGO14944 169 aa11.53□□□□□ -0.56
RET-201ENST00000340058 P0C879 139 aa11.53□□□□□ -0.56
RET-201ENST00000340058 Q8N9W7 124 aa11.53□□□□□ -0.56
RET-201ENST00000340058 FOXE3Q13461 319 aa11.52□□□□□ -0.56
RET-201ENST00000340058 IGHV3-16A0A0C4DH30 117 aa11.52□□□□□ -0.57
RET-201ENST00000340058 A8MWP6 167 aa11.52□□□□□ -0.57
RET-201ENST00000340058 TEX22C9J3V5 150 aa11.52□□□□□ -0.57
RET-201ENST00000340058 TCTEX1D4Q5JR98 221 aa11.52□□□□□ -0.57
RET-201ENST00000340058 DPM2O94777 84 aa11.52□□□□□ -0.57
RET-201ENST00000340058 CTSGP08311 255 aa11.52□□□□□ -0.57
RET-201ENST00000340058 MRAP2Q96G30 205 aa11.52□□□□□ -0.57
RET-201ENST00000340058 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.57
RET-201ENST00000340058 AGPAT4-IT1Q9H0P7 198 aa11.52□□□□□ -0.57
RET-201ENST00000340058 CSTL1Q9H114 145 aa11.52□□□□□ -0.57
RET-201ENST00000340058 TNFRSF6BO95407 300 aa11.51□□□□□ -0.57
RET-201ENST00000340058 ZC2HC1BQ5TFG8 222 aa11.51□□□□□ -0.57
RET-201ENST00000340058 GATA1P15976 413 aaPredicted RBP11.51□□□□□ -0.57
RET-201ENST00000340058 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
RET-201ENST00000340058 MSRB1Q9NZV6 116 aa11.51□□□□□ -0.57
RET-201ENST00000340058 PPP1R17O96001 155 aa11.5□□□□□ -0.57
RET-201ENST00000340058 PLP1P60201 277 aa11.5□□□□□ -0.57
RET-201ENST00000340058 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
RET-201ENST00000340058 EGR2P11161 476 aaPredicted RBP11.5□□□□□ -0.57
RET-201ENST00000340058 CFHR3Q02985 330 aa11.5□□□□□ -0.57
RET-201ENST00000340058 PRAC2D3DTV9 90 aa11.5□□□□□ -0.57
RET-201ENST00000340058 LAGE3Q14657 143 aa11.5□□□□□ -0.57
RET-201ENST00000340058 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
RET-201ENST00000340058 OR2K2Q8NGT1 345 aa11.5□□□□□ -0.57
RET-201ENST00000340058 MRPL16Q9NX20 251 aaKnown RBP11.5□□□□□ -0.57
RET-201ENST00000340058 TMEM238LA0A1B0GVL6 79 aa11.49□□□□□ -0.57
RET-201ENST00000340058 A6NJY4 79 aa11.49□□□□□ -0.57
RET-201ENST00000340058 GP9P14770 177 aa11.49□□□□□ -0.57
RET-201ENST00000340058 Q0VG73 95 aa11.49□□□□□ -0.57
RET-201ENST00000340058 FAM104BQ5XKR9 115 aa11.49□□□□□ -0.57
RET-201ENST00000340058 TRGV4A0A0C4DH28 118 aa11.49□□□□□ -0.57
RET-201ENST00000340058 SMIM13P0DJ93 91 aa11.49□□□□□ -0.57
RET-201ENST00000340058 RASL11AQ6T310 242 aa11.49□□□□□ -0.57
RET-201ENST00000340058 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
RET-201ENST00000340058 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
RET-201ENST00000340058 SMIM27A0A1W2PRY6 76 aa11.49□□□□□ -0.57
RET-201ENST00000340058 IGKCP01834 107 aa11.49□□□□□ -0.57
RET-201ENST00000340058 HIST2H2BCQ6DN03 193 aa11.49□□□□□ -0.57
RET-201ENST00000340058 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
RET-201ENST00000340058 LAMA1P25391 3075 aa11.48□□□□□ -0.57
RET-201ENST00000340058 IGLV11-55A0A075B6I3 123 aa11.48□□□□□ -0.57
RET-201ENST00000340058 NPYP01303 97 aa11.48□□□□□ -0.57
RET-201ENST00000340058 CD28P10747 220 aa11.48□□□□□ -0.57
RET-201ENST00000340058 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
RET-201ENST00000340058 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
RET-201ENST00000340058 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
RET-201ENST00000340058 NPC2P61916 151 aa11.48□□□□□ -0.57
RET-201ENST00000340058 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
RET-201ENST00000340058 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
RET-201ENST00000340058 MRPL27Q9P0M9 148 aaKnown RBP11.48□□□□□ -0.57
RET-201ENST00000340058 K7ERU9 68 aa11.48□□□□□ -0.57
RET-201ENST00000340058 CIDEAO60543 219 aa11.48□□□□□ -0.57
RET-201ENST00000340058 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
RET-201ENST00000340058 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
RET-201ENST00000340058 TMEM14CQ9P0S9 112 aa11.48□□□□□ -0.57
RET-201ENST00000340058 ZNF815PA8K554 130 aa11.47□□□□□ -0.57
RET-201ENST00000340058 GNRH2O43555 120 aa11.47□□□□□ -0.57
RET-201ENST00000340058 ORMDL2Q53FV1 153 aa11.47□□□□□ -0.57
RET-201ENST00000340058 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
RET-201ENST00000340058 DEFB130BP0DP73 79 aa11.47□□□□□ -0.57
RET-201ENST00000340058 DEFB130AP0DP74 79 aa11.47□□□□□ -0.57
RET-201ENST00000340058 TDRG1Q3Y452 100 aa11.47□□□□□ -0.57
RET-201ENST00000340058 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
RET-201ENST00000340058 FAM231DQ6ZW35 169 aa11.47□□□□□ -0.57
RET-201ENST00000340058 TRBV12-3P01733 135 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms