RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 C17orf82Q86X59 251 aaPredicted RBP7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 NFAM1Q8NET5 270 aaPredicted RBP7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 CHCHD2Q9Y6H1 151 aaPredicted RBP7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 KALRNO60229 2985 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 A0A1B0GX51 115 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 PMS2CLQ68D20 193 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 NXT2Q9NPJ8 142 aaKnown RBP7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 OCIAD1Q9NX40 245 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 UQCRQO14949 82 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 GP9P14770 177 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 UCNP55089 124 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 LINC01620Q4KN68 170 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 DEFB126Q9BYW3 111 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
PTCHD4-201ENST00000339488 F8WDY8 70 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 PRCDQ00LT1 54 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 LINC00526Q96FQ7 95 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 FAM19A4Q96LR4 140 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 CUL9Q8IWT3 2517 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 OVOL1O14753 267 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 C14orf178Q8N769 122 aaPredicted RBP7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 C10orf105Q8TEF2 133 aa7.5□□□□□ -1.21
PTCHD4-201ENST00000339488 SAA2P0DJI9 122 aaPredicted RBP7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 C2orf82Q6UX34 121 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 ZNF256Q9Y2P7 627 aaPredicted RBP7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 C15orf65H3BRN8 121 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 TNFAIP6P98066 277 aaPredicted RBP7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 C2orf83Q53S99 150 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 SMCR5Q8TEV8 140 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 DPH3Q96FX2 82 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 JPT2Q9H910 190 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 PRDX2P32119 198 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 SEC61GP60059 68 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 FAM27E3Q08E93 113 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 EBI3Q14213 229 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 TEX36Q5VZQ5 186 aa7.49□□□□□ -1.21
PTCHD4-201ENST00000339488 IGLV3-32A0A0A0MS00 114 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 TRBV7-7A0A0K0K1E9 115 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 TINCRA0A1B0GVN0 87 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 SH2D1AO60880 128 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 LY6DQ14210 128 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 DEFB133Q30KQ1 61 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 LINC00336Q6ZUF6 198 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 DEFB119Q8N690 84 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 Q8TAT8 98 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 PLNP26678 52 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 LYZP61626 148 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 PLGLB1Q02325 96 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 HCP5Q6MZN7 132 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 LOC400499M0QZD8 3231 aa7.48□□□□□ -1.21
PTCHD4-201ENST00000339488 A0A1W2PR77 199 aa7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 F8VRH5 84 aa7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 SAA1P0DJI8 122 aaPredicted RBP7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 Q8N8P6 123 aa7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 RNF138Q8WVD3 245 aa7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 TSPEAR-AS2P59090 65 aa7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 IL17RELQ6ZVW7 336 aa7.47□□□□□ -1.21
PTCHD4-201ENST00000339488 A0A0J9YY99 117 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 TRGV3P03979 118 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 WT1-ASQ06250 92 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 MRAPQ8TCY5 172 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 PRR25Q96S07 402 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 ICE1Q9Y2F5 2266 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 PYGO1Q9Y3Y4 419 aa7.46□□□□□ -1.21
PTCHD4-201ENST00000339488 H7C1H1 209 aa7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 UPK2O00526 184 aa7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 IGHV3-30P01768 117 aa7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 IGHV3-30-5P0DP03 117 aa7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 EGR2P11161 476 aaPredicted RBP7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 PSMG4Q5JS54 123 aa7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 CLEC2BQ92478 149 aa7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 ZNF71Q9NQZ8 489 aaPredicted RBP7.46□□□□□ -1.22
PTCHD4-201ENST00000339488 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 LINC01619G3V211 115 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 COX7CP15954 63 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 HLA-DMBP28068 263 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 RPL13AP40429 203 aaKnown RBP7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 Q6ZSV7 163 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 DTX2Q86UW9 622 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 OTORQ9NRC9 128 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 DNAJC13O75165 2243 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 IGKV2-40A0A087WW87 121 aaPredicted RBP7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 IGKV2D-40P01614 121 aaPredicted RBP7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 RFPL3SP0C7P2 107 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 FAM90A1Q86YD7 464 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 TECTAO75443 2155 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 TRAV17A0A0B4J275 112 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 SS18L1O75177 396 aaPredicted RBP7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 MRPL33O75394 65 aaKnown RBP7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 COX6B1P14854 86 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 CFHR1Q03591 330 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 ERCC8Q13216 396 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 PCOLCEQ15113 449 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 ATXN8Q156A1 80 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms