RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 PSMG3-AS1Q96PY0 264 aa15.8■□□□□ 0.12
RUNX3-202ENST00000338888 IGHG4P01861 327 aa15.79■□□□□ 0.12
RUNX3-202ENST00000338888 TRGV3P03979 118 aa15.79■□□□□ 0.12
RUNX3-202ENST00000338888 FOXI1Q12951 378 aa15.79■□□□□ 0.12
RUNX3-202ENST00000338888 CYSLTR1Q9Y271 337 aa15.79■□□□□ 0.12
RUNX3-202ENST00000338888 IGHV3OR16-8A0A075B7F1 116 aa15.78■□□□□ 0.12
RUNX3-202ENST00000338888 RPL7P18124 248 aaKnown RBP15.78■□□□□ 0.12
RUNX3-202ENST00000338888 LAGE3Q14657 143 aa15.78■□□□□ 0.12
RUNX3-202ENST00000338888 MORN3Q6PF18 240 aaPredicted RBP15.78■□□□□ 0.12
RUNX3-202ENST00000338888 RAB1BQ9H0U4 201 aa15.78■□□□□ 0.12
RUNX3-202ENST00000338888 MRPL16Q9NX20 251 aaKnown RBP15.78■□□□□ 0.12
RUNX3-202ENST00000338888 SMAD5-AS1Q9Y6J3 95 aa15.78■□□□□ 0.12
RUNX3-202ENST00000338888 CSMD1Q96PZ7 3565 aa15.77■□□□□ 0.12
RUNX3-202ENST00000338888 ZGRF1Q86YA3 2104 aa15.77■□□□□ 0.12
RUNX3-202ENST00000338888 HOXA3O43365 443 aaPredicted RBP15.77■□□□□ 0.12
RUNX3-202ENST00000338888 SFTA2Q6UW10 78 aa15.77■□□□□ 0.12
RUNX3-202ENST00000338888 C8orf86Q6ZUL3 223 aa15.77■□□□□ 0.12
RUNX3-202ENST00000338888 PGPEP1Q9NXJ5 209 aa15.77■□□□□ 0.12
RUNX3-202ENST00000338888 KAAG1Q9UBP8 84 aa15.77■□□□□ 0.12
RUNX3-202ENST00000338888 BSPH1Q075Z2 132 aa15.77■□□□□ 0.11
RUNX3-202ENST00000338888 CDIP1Q9H305 208 aa15.77■□□□□ 0.11
RUNX3-202ENST00000338888 MFAP4P55083 255 aa15.76■□□□□ 0.11
RUNX3-202ENST00000338888 DYNAPQ8N1N2 210 aa15.76■□□□□ 0.11
RUNX3-202ENST00000338888 SRSF8Q9BRL6 282 aaKnown RBP15.76■□□□□ 0.11
RUNX3-202ENST00000338888 SPINK8P0C7L1 97 aa15.76■□□□□ 0.11
RUNX3-202ENST00000338888 SMCPP49901 116 aaPredicted RBP15.76■□□□□ 0.11
RUNX3-202ENST00000338888 CFHR4Q92496 578 aa15.76■□□□□ 0.11
RUNX3-202ENST00000338888 MYMXA0A1B0GTQ4 84 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 TMEM238LA0A1B0GVL6 79 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 PRAC2D3DTV9 90 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 TIMM23O14925 209 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 PLNP26678 52 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 SRSF2Q01130 221 aaKnown RBP15.75■□□□□ 0.11
RUNX3-202ENST00000338888 NFE4Q86UQ8 179 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 C1QTNF4Q9BXJ3 329 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 SH3BGRL2Q9UJC5 107 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 TACC2O95359 2948 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 F8W735 103 aaPredicted RBP15.75■□□□□ 0.11
RUNX3-202ENST00000338888 FANCD2OSQ96PS1 177 aa15.75■□□□□ 0.11
RUNX3-202ENST00000338888 OR11H12B2RN74 326 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 MT-ATP8P03928 68 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 CFAP126Q5VTH2 177 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 IGFL3Q6UXB1 125 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 OR11H1Q8NG94 326 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 OR11H2Q8NH07 326 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 UFC1Q9Y3C8 167 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 IGHV3-35A0A0C4DH35 117 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 Q6ZS92 163 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 NRACQ8N912 160 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 GLMPQ8WWB7 406 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 KLK15Q9H2R5 256 aa15.74■□□□□ 0.11
RUNX3-202ENST00000338888 RALYQ9UKM9 306 aaKnown RBP15.74■□□□□ 0.11
RUNX3-202ENST00000338888 IGKV3D-20A0A0C4DH25 116 aa15.73■□□□□ 0.11
RUNX3-202ENST00000338888 IL17RELQ6ZVW7 336 aa15.73■□□□□ 0.11
RUNX3-202ENST00000338888 RNASE6Q93091 150 aaKnown RBP15.73■□□□□ 0.11
RUNX3-202ENST00000338888 BSNQ9UPA5 3926 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 FHL3Q13643 280 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 ZNF418Q8TF45 676 aaPredicted RBP15.72■□□□□ 0.11
RUNX3-202ENST00000338888 DYNLRB1Q9NP97 96 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 C11orf21Q9P2W6 132 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 F8VRH5 84 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 H7C1H1 209 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 PSMB2P49721 201 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 PTH2Q96A98 100 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 C21orf62Q9NYP8 219 aa15.72■□□□□ 0.11
RUNX3-202ENST00000338888 LOC107984156A0A0G2JMH3 177 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 LINC01549A6NIU2 74 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 ARL17AQ8IVW1 177 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 RNF182Q8N6D2 247 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 DLX4Q92988 240 aaPredicted RBP15.71■□□□□ 0.11
RUNX3-202ENST00000338888 RNF5Q99942 180 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 IGLV11-55A0A075B6I3 123 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 NBR2O15453 112 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 LGALS1P09382 135 aaKnown RBP15.71■□□□□ 0.11
RUNX3-202ENST00000338888 KLRD1Q13241 179 aa15.71■□□□□ 0.11
RUNX3-202ENST00000338888 LYNX1G3V0Z9 82 aa15.7■□□□□ 0.1
RUNX3-202ENST00000338888 LYNX1P0DP58 116 aa15.7■□□□□ 0.1
RUNX3-202ENST00000338888 ZFP2Q6ZN57 461 aa15.7■□□□□ 0.1
RUNX3-202ENST00000338888 ADGRG4Q8IZF6 3080 aa15.7■□□□□ 0.1
RUNX3-202ENST00000338888 XGP55808 180 aa15.69■□□□□ 0.1
RUNX3-202ENST00000338888 LY6LH3BQJ8 138 aa15.69■□□□□ 0.1
RUNX3-202ENST00000338888 ATP6V0E2Q8NHE4 81 aa15.69■□□□□ 0.1
RUNX3-202ENST00000338888 LINC01548A6NM66 108 aa15.68■□□□□ 0.1
RUNX3-202ENST00000338888 LINC01619G3V211 115 aa15.68■□□□□ 0.1
RUNX3-202ENST00000338888 ZNF672Q499Z4 452 aaPredicted RBP15.68■□□□□ 0.1
RUNX3-202ENST00000338888 TMEM78Q5T7P6 136 aa15.68■□□□□ 0.1
RUNX3-202ENST00000338888 Q6ZUT4 128 aa15.68■□□□□ 0.1
RUNX3-202ENST00000338888 RAXQ9Y2V3 346 aa15.68■□□□□ 0.1
RUNX3-202ENST00000338888 PCNX1Q96RV3 2341 aa15.68■□□□□ 0.1
RUNX3-202ENST00000338888 HES1Q14469 280 aa15.67■□□□□ 0.1
RUNX3-202ENST00000338888 Q6ZQT7 251 aa15.67■□□□□ 0.1
RUNX3-202ENST00000338888 ZNF48Q96MX3 618 aaPredicted RBP15.67■□□□□ 0.1
RUNX3-202ENST00000338888 SCGB3A1Q96QR1 104 aa15.67■□□□□ 0.1
RUNX3-202ENST00000338888 ONECUT1Q9UBC0 465 aa15.67■□□□□ 0.1
RUNX3-202ENST00000338888 TRAV12-1A0A0B4J245 112 aa15.66■□□□□ 0.1
RUNX3-202ENST00000338888 CTSGP08311 255 aa15.66■□□□□ 0.1
RUNX3-202ENST00000338888 SPTBN4Q9H254 2564 aa15.66■□□□□ 0.1
RUNX3-202ENST00000338888 WNK2Q9Y3S1 2297 aa15.66■□□□□ 0.1
RUNX3-202ENST00000338888 SPANXN1Q5VSR9 72 aa15.66■□□□□ 0.1
RUNX3-202ENST00000338888 IGHV7-4-1A0A0J9YVY3 117 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms