RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 UBE2E1P51965 193 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 PAX8Q06710 450 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 Q8N9W7 124 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 ZNF502Q8TBZ5 544 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 C17orf77Q96MU5 243 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 M0R3E3 92 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 SIVA1O15304 175 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 HBDP02042 147 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 FAM106CPP0CH98 169 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 EGR2P11161 476 aaPredicted RBP8.33□□□□□ -1.08
RTN3-201ENST00000338850 TMEM11P17152 192 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 DLX1P56177 255 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 RHOGP84095 191 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 RELQ04864 619 aaPredicted RBP8.33□□□□□ -1.08
RTN3-201ENST00000338850 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 BATFQ16520 125 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 LHFPL4Q7Z7J7 247 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
RTN3-201ENST00000338850 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 HILPDAQ9Y5L2 63 aa8.33□□□□□ -1.08
RTN3-201ENST00000338850 A0A096LNJ9 63 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 IGHV2-70DA0A0C4DH43 119 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 A0A1W2PRD5 423 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 A0A1W2PRF3 423 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 A0A1W2PRM7 423 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 AVPP01185 164 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 SEC11AP67812 179 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 HES1Q14469 280 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 LYZL1Q6UWQ5 148 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 FER1L6-AS1Q8NA97 138 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 PRSS3P2Q8NHM4 247 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 ASCL2Q99929 193 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 LENEPQ9Y5L5 61 aa8.32□□□□□ -1.08
RTN3-201ENST00000338850 TRBV7-1A0A0A6YYK4 115 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 K7EP13 123 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 IGHG4P01861 327 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 KLRD1Q13241 179 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 LINC00173Q6ZV60 143 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 SIGLEC8Q9NYZ4 499 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 U3KQE9 123 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
RTN3-201ENST00000338850 IGHV4-4A0A075B6R2 117 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 FABP5P3A8MUU1 101 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 D6R8Y8 96 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 M0QZ24 198 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 BUB3O43684 328 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 TFPI2P48307 235 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
RTN3-201ENST00000338850 SCGB2A2Q13296 93 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 KIR3DS1Q14943 382 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 MRPL51Q4U2R6 128 aaKnown RBP8.3□□□□□ -1.08
RTN3-201ENST00000338850 DYNAPQ8N1N2 210 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 TEX29Q8N6K0 151 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 ZNF418Q8TF45 676 aaPredicted RBP8.3□□□□□ -1.08
RTN3-201ENST00000338850 NXT2Q9NPJ8 142 aaKnown RBP8.3□□□□□ -1.08
RTN3-201ENST00000338850 CBY1Q9Y3M2 126 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 SMAD5-AS1Q9Y6J3 95 aa8.3□□□□□ -1.08
RTN3-201ENST00000338850 J3QLI3 93 aa8.29□□□□□ -1.08
RTN3-201ENST00000338850 HILS1P60008 231 aa8.29□□□□□ -1.08
RTN3-201ENST00000338850 KLF17Q5JT82 389 aaPredicted RBP8.29□□□□□ -1.08
RTN3-201ENST00000338850 EEF1AKMT3Q96AZ1 226 aa8.29□□□□□ -1.08
RTN3-201ENST00000338850 AJUBAQ96IF1 538 aa8.29□□□□□ -1.08
RTN3-201ENST00000338850 WNK2Q9Y3S1 2297 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 IGKV2-40A0A087WW87 121 aaPredicted RBP8.28□□□□□ -1.08
RTN3-201ENST00000338850 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 FAM223BA6NKX1 122 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 NCBP2LA6PVI3 153 aaKnown RBP8.28□□□□□ -1.08
RTN3-201ENST00000338850 H3BUA1 57 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 FSHBP01225 129 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 IGKV2D-40P01614 121 aaPredicted RBP8.28□□□□□ -1.08
RTN3-201ENST00000338850 FGF6P10767 208 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 GATA3P23771 443 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 FBLN7Q53RD9 439 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 C19orf54Q5BKX5 351 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 C9orf47Q6ZRZ4 202 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 FAM223AQ8IWN6 122 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 BOD1L2Q8IYS8 172 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 MAP1LC3AQ9H492 121 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 SMPXQ9UHP9 88 aa8.28□□□□□ -1.08
RTN3-201ENST00000338850 CENPVL3A0A0U1RRI6 287 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 TMEM213A2RRL7 107 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 TMEM89A2RUT3 159 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 OR2T8A6NH00 312 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 TAX1BP3O14907 124 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 CD24P25063 80 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 ZFP36P26651 326 aaKnown RBP8.27□□□□□ -1.09
RTN3-201ENST00000338850 GPR183P32249 361 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 IFI27P40305 119 aaPredicted RBP8.27□□□□□ -1.09
RTN3-201ENST00000338850 PTTG1IPP53801 180 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms