RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 K7EQG2 157 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 CTRLP40313 264 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 SNRPD3P62318 126 aaKnown RBP12.25□□□□□ -0.45
HPS1-202ENST00000338546 PAFAH1B2P68402 229 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 SLAQ13239 276 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 APRG1Q8IVJ8 170 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 KLHL30-AS1Q8NEE0 82 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 HIST1H2BLQ99880 126 aa12.25□□□□□ -0.45
HPS1-202ENST00000338546 F2Z2F3 143 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 ORM1P02763 201 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 IGLC6P0CF74 106 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 EDN2P20800 178 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 LINC01006Q8NI28 216 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 TMEM18Q96B42 140 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
HPS1-202ENST00000338546 SLURP1P55000 103 aa12.23□□□□□ -0.45
HPS1-202ENST00000338546 ZNF493Q6ZR52 646 aa12.23□□□□□ -0.45
HPS1-202ENST00000338546 C18orf65Q6ZTR6 163 aa12.23□□□□□ -0.45
HPS1-202ENST00000338546 FER1L6-AS1Q8NA97 138 aa12.23□□□□□ -0.45
HPS1-202ENST00000338546 OR9G4Q8NGQ1 327 aa12.23□□□□□ -0.45
HPS1-202ENST00000338546 PACRGQ96M98 296 aaPredicted RBP12.23□□□□□ -0.45
HPS1-202ENST00000338546 CNFNQ9BYD5 112 aa12.23□□□□□ -0.45
HPS1-202ENST00000338546 SRIP30626 198 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 LYZL1Q6UWQ5 148 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 BAGE3Q86Y29 109 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 TSSC4Q9Y5U2 329 aaPredicted RBP12.22□□□□□ -0.45
HPS1-202ENST00000338546 HIVEP2P31629 2446 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 IGKV3-7A0A075B6H7 116 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 TRAV21A0A0B4J279 112 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 GRIFINA4D1Z8 144 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 FABP4P15090 132 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 FHL3Q13643 280 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 PDZD11Q5EBL8 140 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 ZNF575Q86XF7 245 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 ZFAND2AQ8N6M9 145 aa12.22□□□□□ -0.45
HPS1-202ENST00000338546 TMSB15BA0A087X1C1 80 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 AMBPP02760 352 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 DEFB136Q30KP8 78 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 ADAMTSL5Q6ZMM2 481 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 OR10D4PQ8NGN7 298 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 C12orf57Q99622 126 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 SMR3AQ99954 134 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 ALKBH7Q9BT30 221 aaPredicted RBP12.21□□□□□ -0.46
HPS1-202ENST00000338546 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.46
HPS1-202ENST00000338546 DNLZQ5SXM8 178 aa12.2□□□□□ -0.46
HPS1-202ENST00000338546 TMEM256Q8N2U0 113 aa12.2□□□□□ -0.46
HPS1-202ENST00000338546 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
HPS1-202ENST00000338546 LOC102724200A0A096LPH7 203 aaPredicted RBP12.19□□□□□ -0.46
HPS1-202ENST00000338546 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
HPS1-202ENST00000338546 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
HPS1-202ENST00000338546 CSN3P07498 182 aa12.19□□□□□ -0.46
HPS1-202ENST00000338546 WFDC3Q8IUB2 231 aa12.19□□□□□ -0.46
HPS1-202ENST00000338546 GPX1P07203 203 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 ZNF705DP0CH99 300 aaPredicted RBP12.18□□□□□ -0.46
HPS1-202ENST00000338546 ZNF705BP0CI00 300 aaPredicted RBP12.18□□□□□ -0.46
HPS1-202ENST00000338546 CD28P10747 220 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 C18orf32Q8TCD1 76 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 DLX4Q92988 240 aaPredicted RBP12.18□□□□□ -0.46
HPS1-202ENST00000338546 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 SIGLEC8Q9NYZ4 499 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 TRAV25A0A0B4J276 109 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 A0A0J9YX75 114 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 KLLNB2CW77 178 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 SERF1AO75920 110 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 LEPP41159 167 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 PSMG4Q5JS54 123 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 FOXI2Q6ZQN5 318 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 RAX2Q96IS3 184 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 C11orf21Q9P2W6 132 aa12.18□□□□□ -0.46
HPS1-202ENST00000338546 FLNBO75369 2602 aaKnown RBP12.17□□□□□ -0.46
HPS1-202ENST00000338546 F6UB75 175 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 CCL24O00175 119 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 ZNF688P0C7X2 276 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 LINC00310P59036 64 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 PRR9Q5T870 116 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 RNF114Q9Y508 228 aa12.17□□□□□ -0.46
HPS1-202ENST00000338546 IGHV4-4A0A075B6R2 117 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 SNAI2O43623 268 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 TFPI2P48307 235 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 PROK1P58294 105 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 CACNG7P62955 275 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
HPS1-202ENST00000338546 NOTCH2Q04721 2471 aa12.16□□□□□ -0.46
HPS1-202ENST00000338546 A0A1B0GUS0 222 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 TCF21O43680 179 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 NUPR1O60356 82 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 TSPOP30536 169 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 TWIST1Q15672 202 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 FAM104BQ5XKR9 115 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 DYNLRB2Q8TF09 96 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 KCNS1Q96KK3 526 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms