RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TNFRSF18Q9Y5U5 241 aa9.2□□□□□ -0.94
NUDCD3-201ENST00000338427 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 HMGB3O15347 200 aaKnown RBP9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 ZNF680Q8NEM1 530 aa9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 MRPL32Q9BYC8 188 aaKnown RBP9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 PTTG2Q9NZH5 202 aa9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 MBD2Q9UBB5 411 aa9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 MRPS16Q9Y3D3 137 aaKnown RBP9.19□□□□□ -0.94
NUDCD3-201ENST00000338427 PGPA6NDG6 321 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 DIRC3C9JPN6 131 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 H3BNG1 76 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 PAX4O43316 350 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 GNRH2O43555 120 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 NMBP08949 121 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 FHL2Q14192 279 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 SPATA12Q7Z6I5 190 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 SCGB1C1Q8TD33 95 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 C8orf49Q96NF6 230 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 RPH3ALQ9UNE2 315 aa9.18□□□□□ -0.94
NUDCD3-201ENST00000338427 IFNA5P01569 189 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 SFTA3P0C7M3 94 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 CSN1S1P47710 185 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 UBE2L3P68036 154 aaKnown RBP9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 TVP23CQ96ET8 276 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 SGK494Q96LW2 274 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 C18orf15Q96N68 181 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 UPK3BQ9BT76 320 aa9.17□□□□□ -0.94
NUDCD3-201ENST00000338427 CRYBA4P53673 196 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 RAB2AP61019 212 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 ZNF266Q14584 549 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 TMEM183BQ1AE95 376 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 TMEM183AQ8IXX5 376 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 ZNF479Q96JC4 524 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 ST6GAL2Q96JF0 529 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 ARPC5LQ9BPX5 153 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 HHLA3Q9XRX5 114 aa9.16□□□□□ -0.94
NUDCD3-201ENST00000338427 TRAV8-1A0A0A6YYK1 113 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 GNG5P63218 68 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 Q5BKY6 102 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 LYPD1Q8N2G4 141 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 KCNIP2Q9NS61 270 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 ALG5Q9Y673 324 aa9.15□□□□□ -0.94
NUDCD3-201ENST00000338427 RBAKDNA6NC62 111 aa9.14□□□□□ -0.95
NUDCD3-201ENST00000338427 NXPH4O95158 308 aa9.14□□□□□ -0.95
NUDCD3-201ENST00000338427 LINC00315P59091 139 aa9.14□□□□□ -0.95
NUDCD3-201ENST00000338427 GOLT1AQ6ZVE7 132 aa9.14□□□□□ -0.95
NUDCD3-201ENST00000338427 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
NUDCD3-201ENST00000338427 NAGKQ9UJ70 344 aa9.14□□□□□ -0.95
NUDCD3-201ENST00000338427 F6UZH7 168 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 SIVA1O15304 175 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 DEFA1P59665 94 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 DEFA3P59666 94 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 KHDC3LQ587J8 217 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 Q6AWC8 147 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 ICOSQ9Y6W8 199 aa9.13□□□□□ -0.95
NUDCD3-201ENST00000338427 TRGV4A0A0C4DH28 118 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 TAS2R45P59539 299 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 ACOT6Q3I5F7 207 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 TTC32Q5I0X7 151 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 FAM159AQ6UWV7 190 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 OR10G4Q8NGN3 311 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 OR10G9Q8NGN4 311 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
NUDCD3-201ENST00000338427 IGHV3-16A0A0C4DH30 117 aa9.11□□□□□ -0.95
NUDCD3-201ENST00000338427 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
NUDCD3-201ENST00000338427 HSD17B11Q8NBQ5 300 aa9.11□□□□□ -0.95
NUDCD3-201ENST00000338427 CMTM2Q8TAZ6 248 aa9.11□□□□□ -0.95
NUDCD3-201ENST00000338427 RASL10AQ92737 203 aa9.11□□□□□ -0.95
NUDCD3-201ENST00000338427 K7EQD1 137 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 PET100P0DJ07 73 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 GYPEP15421 78 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 ZNF80P51504 273 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 MRPL23Q16540 153 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
NUDCD3-201ENST00000338427 TYMSP04818 313 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 ARL14EPLP0DKL9 152 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 ATP6V0CP27449 155 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 SLAQ13239 276 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 NEGR1Q7Z3B1 354 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 WFDC10BQ8IUB3 73 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 RAB24Q969Q5 203 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 SPXQ9BT56 116 aa9.09□□□□□ -0.95
NUDCD3-201ENST00000338427 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
NUDCD3-201ENST00000338427 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
NUDCD3-201ENST00000338427 BTF3P20290 206 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-201ENST00000338427 DPPA3Q6W0C5 159 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms