RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NMES1Q9C002 83 aa7.38□□□□□ -1.23
CAPN3-202ENST00000337571 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 IGKV2-40A0A087WW87 121 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-202ENST00000337571 A0A096LPF7 62 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 G3V3Q6 166 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 PAX4O43316 350 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 OR7C2O60412 319 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 SPINK4O60575 86 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 PFDN1O60925 122 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 SIX6O95475 246 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 IGKV2D-40P01614 121 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-202ENST00000337571 ZNF138P52744 262 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 TCL1AP56279 114 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 IBA57Q5T440 356 aaKnown RBP7.37□□□□□ -1.23
CAPN3-202ENST00000337571 SPATA12Q7Z6I5 190 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 VGLL1Q99990 258 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 KLF12Q9Y4X4 402 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 ICOSQ9Y6W8 199 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
CAPN3-202ENST00000337571 RYR1P21817 5038 aa7.37□□□□□ -1.23
CAPN3-202ENST00000337571 SIVA1O15304 175 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 PRAF2O60831 178 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 OR10J4P0C629 311 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 RANP62826 216 aaKnown RBP7.36□□□□□ -1.23
CAPN3-202ENST00000337571 MAPKAPK5-AS1Q8N8E1 139 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 SCGB1C1Q8TD33 95 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 VSIG2Q96IQ7 327 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 FAM167A-AS1Q96KT0 104 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
CAPN3-202ENST00000337571 OR5AC2Q9NZP5 309 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 PRO0255Q9UI72 69 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 HHLA3Q9XRX5 114 aa7.36□□□□□ -1.23
CAPN3-202ENST00000337571 TRAV9-2A0A087WT02 112 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 TRBV7-9A0A0J9YWB2 115 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 IFNA5P01569 189 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 IGHV3-53P01767 116 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 ZNF415Q09FC8 603 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 LYPD1Q8N2G4 141 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 ZFAND2AQ8N6M9 145 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 FXYD5Q96DB9 178 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 MRPL16Q9NX20 251 aaKnown RBP7.35□□□□□ -1.23
CAPN3-202ENST00000337571 TP53TG3Q9ULZ0 132 aa7.35□□□□□ -1.23
CAPN3-202ENST00000337571 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 TRGV4A0A0C4DH28 118 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 RBAKDNA6NC62 111 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 SMLR1H3BR10 107 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 PET100P0DJ07 73 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 TAS2R45P59539 299 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
CAPN3-202ENST00000337571 Q5BKY6 102 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 FFAR4Q5NUL3 377 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 FAM74A1Q5RGS3 127 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 FAM159AQ6UWV7 190 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 AKAP14Q86UN6 197 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 ATP5SQ99766 215 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 MED28Q9H204 178 aa7.34□□□□□ -1.23
CAPN3-202ENST00000337571 SSNA1O43805 119 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 NXPH4O95158 308 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 CRYBA4P53673 196 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 UBE2L3P68036 154 aaKnown RBP7.33□□□□□ -1.24
CAPN3-202ENST00000337571 ZNF266Q14584 549 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 KHDC3LQ587J8 217 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 MUC21Q5SSG8 566 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 PRR9Q5T870 116 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 TCTE3Q8IZS6 198 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 Q8TAT8 98 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 PPP1R1CQ8WVI7 109 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 PCNPQ8WW12 178 aaKnown RBP7.33□□□□□ -1.24
CAPN3-202ENST00000337571 PHYHIPLQ96FC7 376 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 HYLS1Q96M11 299 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 C8orf49Q96NF6 230 aa7.33□□□□□ -1.24
CAPN3-202ENST00000337571 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 A0A1W2PPV4 95 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 H0YIZ8 118 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 NKX2-5P52952 324 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-202ENST00000337571 H2BFSP57053 126 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 LINC00315P59091 139 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 FHL2Q14192 279 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 LYPD5Q6UWN5 251 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 Q6ZQT7 251 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 NEGR1Q7Z3B1 354 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 NFE4Q86UQ8 179 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 OR11H4Q8NGC9 324 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 SPXQ9BT56 116 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 LENEPQ9Y5L5 61 aa7.32□□□□□ -1.24
CAPN3-202ENST00000337571 DIRC3C9JPN6 131 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 MPC2O95563 127 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 RPL12P30050 165 aaKnown RBP7.31□□□□□ -1.24
CAPN3-202ENST00000337571 SRIP30626 198 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 TMEM183BQ1AE95 376 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 IQCF2Q8IXL9 164 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 TMEM183AQ8IXX5 376 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 SMIM3Q9BZL3 60 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms