RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 C2orf91Q6ZV80 131 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 ABCA2Q9BZC7 2435 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 NBR2O15453 112 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 P0C879 139 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 HLA-DMBP28068 263 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
COL2A1-201ENST00000337299 F8VRH5 84 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 C11orf53Q8IXP5 236 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 MBD6Q96DN6 1003 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 Q8N8P6 123 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 KLHL30-AS1Q8NEE0 82 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 PRR25Q96S07 402 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 M0R2P5 195 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 INSL3P51460 131 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 NDPQ00604 133 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 ATXN8Q156A1 80 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 LYPD2Q6UXB3 125 aa10.52□□□□□ -0.73
COL2A1-201ENST00000337299 TLN2Q9Y4G6 2542 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
COL2A1-201ENST00000337299 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
COL2A1-201ENST00000337299 LINC00527Q9UJ94 153 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 IGHV3OR16-10A0A075B7F0 116 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 CEACAM4O75871 244 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 UTF1Q5T230 341 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 SPANXB1Q9NS25 103 aaPredicted RBP10.51□□□□□ -0.73
COL2A1-201ENST00000337299 RS1O15537 224 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 SRD5A1P18405 259 aa10.51□□□□□ -0.73
COL2A1-201ENST00000337299 E7EUB6 86 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 PPP1R17O96001 155 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 CD7P09564 240 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 BSPH1Q075Z2 132 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 OR13C6PQ8NH95 151 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 IGHV3-11P01762 117 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 IL17RELQ6ZVW7 336 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 IGKV2D-26A0A0A0MRZ7 120 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 H3BMM0 161 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 IGHV1-8P0DP01 117 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 LYPD1Q8N2G4 141 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 UBE2WQ96B02 151 aa10.5□□□□□ -0.73
COL2A1-201ENST00000337299 SETD2Q9BYW2 2564 aaPredicted RBP10.5□□□□□ -0.73
COL2A1-201ENST00000337299 ZFYVE26Q68DK2 2539 aa10.49□□□□□ -0.73
COL2A1-201ENST00000337299 SORL1Q92673 2214 aa10.49□□□□□ -0.73
COL2A1-201ENST00000337299 NUP210LQ5VU65 1888 aa10.49□□□□□ -0.73
COL2A1-201ENST00000337299 A0A087WWL8 130 aa10.49□□□□□ -0.73
COL2A1-201ENST00000337299 KLRD1Q13241 179 aa10.49□□□□□ -0.73
COL2A1-201ENST00000337299 SPXQ9BT56 116 aa10.49□□□□□ -0.73
COL2A1-201ENST00000337299 TAL2Q16559 108 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 KRTAP27-1Q3LI81 207 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 RNF138Q8WVD3 245 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 A0A087WX48 190 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 ADARB2-AS1A8MUL3 147 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 PMVKQ15126 192 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 Q6ZUT4 128 aa10.48□□□□□ -0.73
COL2A1-201ENST00000337299 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 GP9P14770 177 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 UCNP55089 124 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 DAZAP2Q15038 168 aaPredicted RBP10.47□□□□□ -0.73
COL2A1-201ENST00000337299 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
COL2A1-201ENST00000337299 TRAV21A0A0B4J279 112 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 DKK1O94907 266 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 ODF1Q14990 250 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 EEF1AKMT3Q96AZ1 226 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 LY6DQ14210 128 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 IGFBPL1Q8WX77 278 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
COL2A1-201ENST00000337299 CDH23Q9H251 3354 aa10.46□□□□□ -0.73
COL2A1-201ENST00000337299 CD28P10747 220 aa10.46□□□□□ -0.73
COL2A1-201ENST00000337299 LY6EQ16553 131 aa10.46□□□□□ -0.73
COL2A1-201ENST00000337299 ZNF625Q96I27 306 aaPredicted RBP10.46□□□□□ -0.73
COL2A1-201ENST00000337299 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.73
COL2A1-201ENST00000337299 TOMM7Q9P0U1 55 aa10.46□□□□□ -0.73
COL2A1-201ENST00000337299 TRGV3P03979 118 aa10.46□□□□□ -0.74
COL2A1-201ENST00000337299 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.74
COL2A1-201ENST00000337299 C19orf54Q5BKX5 351 aa10.46□□□□□ -0.74
COL2A1-201ENST00000337299 Q8N7P7 452 aa10.46□□□□□ -0.74
COL2A1-201ENST00000337299 SLC25A15Q9Y619 301 aa10.46□□□□□ -0.74
COL2A1-201ENST00000337299 ID1P41134 155 aa10.46□□□□□ -0.74
COL2A1-201ENST00000337299 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
COL2A1-201ENST00000337299 ZFP2Q6ZN57 461 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 MDS2Q8NDY4 140 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 DDB2Q92466 427 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 URB1-AS1Q96HZ7 61 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms