RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 LRRK2Q5S007 2527 aa12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 IGHV4-31P0DP07 118 aa12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 HIST1H1AQ02539 215 aaPredicted RBP12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 DEFB113Q30KQ7 82 aa12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 LRRC75A-AS1Q8N1F1 130 aa12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 TMEM208Q9BTX3 173 aa12.73□□□□□ -0.37
TMEM39B-201ENST00000336294 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 KRTAP10-9P60411 292 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 MAP1LC3CQ9BXW4 147 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 SPG11Q96JI7 2443 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.72□□□□□ -0.379e-7■■■■■ 34.7
TMEM39B-201ENST00000336294 FSHBP01225 129 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 IGLL1P15814 213 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 G0S2P27469 103 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 BATFQ16520 125 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 TMEM95Q3KNT9 176 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 ATOH7Q8N100 152 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
TMEM39B-201ENST00000336294 FLNBO75369 2602 aaKnown RBP12.71□□□□□ -0.37
TMEM39B-201ENST00000336294 TENM4Q6N022 2769 aa12.71□□□□□ -0.37
TMEM39B-201ENST00000336294 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.38
TMEM39B-201ENST00000336294 TMEM89A2RUT3 159 aa12.71□□□□□ -0.38
TMEM39B-201ENST00000336294 TWIST1Q15672 202 aa12.71□□□□□ -0.38
TMEM39B-201ENST00000336294 ZNF575Q86XF7 245 aa12.71□□□□□ -0.38
TMEM39B-201ENST00000336294 U3KQK5 164 aa12.71□□□□□ -0.38
TMEM39B-201ENST00000336294 SOCS3O14543 225 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 PSMB8P28062 276 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 Q5PR19 223 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 SPATA12Q7Z6I5 190 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 C20orf173Q96LM9 149 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 DAZ1Q9NQZ3 744 aaKnown RBP12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 LENEPQ9Y5L5 61 aa12.7□□□□□ -0.38
TMEM39B-201ENST00000336294 VPS13CQ709C8 3753 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 MUC21A0A0G2JKD1 596 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 MUC21A0A140T8X8 626 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 OVOL1O14753 267 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 CSN3P07498 182 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 FAM106AQ4KMX7 169 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 MUC21Q5SSG8 566 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 AMN1Q8IY45 258 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 GOLT1BQ9Y3E0 138 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 CSMD2Q7Z408 3487 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 HSBP1L1C9JCN9 74 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 D6R8Y8 96 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 K7EMT4 169 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 FA2HQ7L5A8 372 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 FBN2P35556 2912 aa12.69□□□□□ -0.38
TMEM39B-201ENST00000336294 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 MAJINQ3KP22 176 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 MRPL51Q4U2R6 128 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 TM4SF20Q53R12 229 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 Q6YL49 198 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 OR10J6PQ8NGY7 276 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 OR10AG1Q8NH19 301 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 LINC00477Q96M19 166 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 PRELID3AQ96N28 172 aa12.68□□□□□ -0.38
TMEM39B-201ENST00000336294 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
TMEM39B-201ENST00000336294 LINC01545Q5VT33 79 aa12.67□□□□□ -0.38
TMEM39B-201ENST00000336294 SMPXQ9UHP9 88 aa12.67□□□□□ -0.38
TMEM39B-201ENST00000336294 FOSL1P15407 271 aa12.67□□□□□ -0.38
TMEM39B-201ENST00000336294 STPG4Q8N801 248 aa12.67□□□□□ -0.38
TMEM39B-201ENST00000336294 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
TMEM39B-201ENST00000336294 LINC00173Q6ZV60 143 aa12.66□□□□□ -0.38
TMEM39B-201ENST00000336294 C11orf21Q9P2W6 132 aa12.66□□□□□ -0.38
TMEM39B-201ENST00000336294 UFC1Q9Y3C8 167 aa12.66□□□□□ -0.38
TMEM39B-201ENST00000336294 CELSR2Q9HCU4 2923 aa12.66□□□□□ -0.38
TMEM39B-201ENST00000336294 PLA2G2AP14555 144 aa12.65□□□□□ -0.38
TMEM39B-201ENST00000336294 FOXE3Q13461 319 aa12.65□□□□□ -0.38
TMEM39B-201ENST00000336294 CKS2P33552 79 aa12.65□□□□□ -0.39
TMEM39B-201ENST00000336294 DPF1Q92782 380 aa12.65□□□□□ -0.39
TMEM39B-201ENST00000336294 Q96MF0 132 aa12.65□□□□□ -0.39
TMEM39B-201ENST00000336294 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 SLC25A34Q6PIV7 304 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 ZNF747Q9BV97 191 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 MSRB1Q9NZV6 116 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
TMEM39B-201ENST00000336294 CR1P17927 2039 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 PPBPP02775 128 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 TFPI2P48307 235 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 C10orf99Q6UWK7 81 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 PRSS57Q6UWY2 283 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 ANKRD17O75179 2603 aaKnown RBP12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 ZFHX3Q15911 3703 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 CENPEQ02224 2701 aa12.63□□□□□ -0.39
TMEM39B-201ENST00000336294 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms