RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 MUC21Q5SSG8 566 aa6.76□□□□□ -1.33
CPNE8-201ENST00000331366 FA2HQ7L5A8 372 aa6.76□□□□□ -1.33
CPNE8-201ENST00000331366 PRNTQ86SH4 94 aa6.76□□□□□ -1.33
CPNE8-201ENST00000331366 ATP6V0E2Q8NHE4 81 aa6.76□□□□□ -1.33
CPNE8-201ENST00000331366 IFI27L1Q96BM0 104 aa6.76□□□□□ -1.33
CPNE8-201ENST00000331366 ADGRG4Q8IZF6 3080 aa6.76□□□□□ -1.33
CPNE8-201ENST00000331366 TMEM89A2RUT3 159 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 FABP5P3A8MUU1 101 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 E9PLD3 99 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 LYZP61626 148 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 SHISA2Q6UWI4 295 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 ZGRF1Q86YA3 2104 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 IGHV1-69DA0A0B4J2H0 117 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 D6R8Y8 96 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 IGF1P05019 195 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
CPNE8-201ENST00000331366 CAMPP49913 170 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 CSPG4Q6UVK1 2322 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 TLN2Q9Y4G6 2542 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 ZNF80P51504 273 aaPredicted RBP6.75□□□□□ -1.33
CPNE8-201ENST00000331366 SBSPONQ8IVN8 264 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 GLMPQ8WWB7 406 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 ARFGEF3Q5TH69 2177 aa6.75□□□□□ -1.33
CPNE8-201ENST00000331366 TRAV8-6A0A0B4J262 113 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 NDPQ00604 133 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 Q71RC1 249 aaPredicted RBP6.74□□□□□ -1.33
CPNE8-201ENST00000331366 DEFB108BQ8NET1 73 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 ZNF479Q96JC4 524 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 MAP1LC3AQ9H492 121 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 TRBV7-3A0A075B6L6 115 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.74□□□□□ -1.33
CPNE8-201ENST00000331366 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 SPINK4O60575 86 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 PLNP26678 52 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 HERV-K104P63124 156 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 FOXC1Q12948 553 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 PIK3CD-AS1Q5SR53 167 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 A0A087WX48 190 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 PPP1R17O96001 155 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 NPYP01303 97 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 JMJD8Q96S16 334 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 SS18L2Q9UHA2 77 aa6.74□□□□□ -1.33
CPNE8-201ENST00000331366 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 A1L4Q6 167 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 ENSAO43768 121 aaKnown RBP6.73□□□□□ -1.33
CPNE8-201ENST00000331366 IL4P05112 153 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 CFHR3Q02985 330 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 SPANXB1Q9NS25 103 aaPredicted RBP6.73□□□□□ -1.33
CPNE8-201ENST00000331366 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.73□□□□□ -1.334e-11■■■■■ 41.7
CPNE8-201ENST00000331366 SETD2Q9BYW2 2564 aaPredicted RBP6.73□□□□□ -1.33
CPNE8-201ENST00000331366 TRAV8-1A0A0A6YYK1 113 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 LOXL1Q08397 574 aaPredicted RBP6.73□□□□□ -1.33
CPNE8-201ENST00000331366 FOXE3Q13461 319 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 COX6B1P14854 86 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
CPNE8-201ENST00000331366 POLQO75417 2590 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 UCNP55089 124 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 ERCC8Q13216 396 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 TMEM158Q8WZ71 300 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 SPATA25Q9BR10 227 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 PRO0461Q9UI25 63 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 UQCRFS1P47985 274 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 OR2K2Q8NGT1 345 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 CCL17Q92583 94 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 LRRK2Q5S007 2527 aa6.72□□□□□ -1.33
CPNE8-201ENST00000331366 FAM106CPP0CH98 169 aa6.71□□□□□ -1.33
CPNE8-201ENST00000331366 FAM106AQ4KMX7 169 aa6.71□□□□□ -1.33
CPNE8-201ENST00000331366 NEXN-AS1Q8NBZ9 246 aa6.71□□□□□ -1.33
CPNE8-201ENST00000331366 RNF183Q96D59 192 aa6.71□□□□□ -1.33
CPNE8-201ENST00000331366 LINC00477Q96M19 166 aa6.71□□□□□ -1.33
CPNE8-201ENST00000331366 DYNLRB1Q9NP97 96 aa6.71□□□□□ -1.33
CPNE8-201ENST00000331366 A0A0J9YX75 114 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 ZNF138P52744 262 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 LINC00467Q9BRT7 94 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 ZNF256Q9Y2P7 627 aaPredicted RBP6.71□□□□□ -1.34
CPNE8-201ENST00000331366 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.34
CPNE8-201ENST00000331366 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 F8W1H4 67 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 H3BUT2 72 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 K7EMT4 169 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 CEND1Q8N111 149 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 C5orf56Q8N8D9 126 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 TSSC4Q9Y5U2 329 aaPredicted RBP6.71□□□□□ -1.34
CPNE8-201ENST00000331366 MALRD1Q5VYJ5 2156 aa6.71□□□□□ -1.34
CPNE8-201ENST00000331366 TMEM213A2RRL7 107 aa6.7□□□□□ -1.34
CPNE8-201ENST00000331366 GPHB5Q86YW7 130 aa6.7□□□□□ -1.34
CPNE8-201ENST00000331366 TIMD4Q96H15 378 aa6.7□□□□□ -1.34
CPNE8-201ENST00000331366 NDUFA4O00483 81 aa6.7□□□□□ -1.34
CPNE8-201ENST00000331366 OVOL1O14753 267 aa6.7□□□□□ -1.34
CPNE8-201ENST00000331366 DPM2O94777 84 aa6.7□□□□□ -1.34
CPNE8-201ENST00000331366 IGKCP01834 107 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms