RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TPRP12270 2363 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 ADGRG4Q8IZF6 3080 aa14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 E7EQL1 145 aa14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 TNFRSF13BO14836 293 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 DLX1P56177 255 aa14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 Q8N8P6 123 aa14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 PSMG3-AS1Q96PY0 264 aa14.07□□□□□ -0.16
CLSTN3-202ENST00000331148 A0A1B0GWB2 263 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 PRSS47A8MTI9 375 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 CCL17Q92583 94 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 PKD1L2Q7Z442 2459 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 NBASA2RRP1 2371 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 TRBV7-3A0A075B6L6 115 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 APOMO95445 188 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 PRB3Q04118 309 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 C20orf78Q9BR46 151 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 ABCA1O95477 2261 aa14.06□□□□□ -0.16
CLSTN3-202ENST00000331148 IGLV2-18A0A075B6J9 118 aa14.05□□□□□ -0.16
CLSTN3-202ENST00000331148 ORM1P02763 201 aa14.05□□□□□ -0.16
CLSTN3-202ENST00000331148 SRSF2Q01130 221 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-202ENST00000331148 CRYBA4P53673 196 aa14.04□□□□□ -0.16
CLSTN3-202ENST00000331148 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-202ENST00000331148 GEMIN7Q9H840 131 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-202ENST00000331148 MRPL16Q9NX20 251 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-202ENST00000331148 S4R3C0 116 aa14.04□□□□□ -0.16
CLSTN3-202ENST00000331148 CNIH1O95406 144 aa14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 IGLV1-47P01700 117 aa14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 C1QTNF4Q9BXJ3 329 aa14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 A0A087WX48 190 aa14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 NCBP2LA6PVI3 153 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 DTX2Q86UW9 622 aa14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 RAB1BQ9H0U4 201 aa14.03□□□□□ -0.16
CLSTN3-202ENST00000331148 PPIFP30405 207 aaKnown RBP14.02□□□□□ -0.16
CLSTN3-202ENST00000331148 FOXI1Q12951 378 aa14.02□□□□□ -0.16
CLSTN3-202ENST00000331148 C8orf86Q6ZUL3 223 aa14.02□□□□□ -0.16
CLSTN3-202ENST00000331148 MYOZ3Q8TDC0 251 aa14.02□□□□□ -0.16
CLSTN3-202ENST00000331148 CDIP1Q9H305 208 aa14.02□□□□□ -0.16
CLSTN3-202ENST00000331148 DYNLRB1Q9NP97 96 aa14.02□□□□□ -0.16
CLSTN3-202ENST00000331148 RELNP78509 3460 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 B9A039 149 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 LINC01619G3V211 115 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 BUB1B-PAK6H3BSN5 160 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 PLNP26678 52 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 MORN3Q6PF18 240 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 SYT8Q8NBV8 401 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 RPEQ96AT9 228 aa14.02□□□□□ -0.17
CLSTN3-202ENST00000331148 ROS1P08922 2347 aa14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 NDUFA3O95167 84 aa14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 GNLYP22749 145 aa14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 ATP6V0E2Q8NHE4 81 aa14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 KLRD1Q13241 179 aa14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 IGFL4Q6B9Z1 124 aa14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 ZNF418Q8TF45 676 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-202ENST00000331148 HLA-DMBP28068 263 aa14□□□□□ -0.17
CLSTN3-202ENST00000331148 LAGE3Q14657 143 aa14□□□□□ -0.17
CLSTN3-202ENST00000331148 KAAG1Q9UBP8 84 aa14□□□□□ -0.17
CLSTN3-202ENST00000331148 KALRNO60229 2985 aa14□□□□□ -0.17
CLSTN3-202ENST00000331148 FABP5P3A8MUU1 101 aa13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 IGHG4P01861 327 aa13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 RPL7P18124 248 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 CFAP126Q5VTH2 177 aa13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 LCNL1Q6ZST4 164 aa13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 MYMXA0A1B0GTQ4 84 aa13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 SMCPP49901 116 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 ZNF672Q499Z4 452 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 CYSLTR1Q9Y271 337 aa13.99□□□□□ -0.17
CLSTN3-202ENST00000331148 TRGV3P03979 118 aa13.98□□□□□ -0.17
CLSTN3-202ENST00000331148 PGPEP1Q9NXJ5 209 aa13.98□□□□□ -0.17
CLSTN3-202ENST00000331148 HOXA3O43365 443 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-202ENST00000331148 SPINK8P0C7L1 97 aa13.98□□□□□ -0.17
CLSTN3-202ENST00000331148 NRACQ8N912 160 aa13.98□□□□□ -0.17
CLSTN3-202ENST00000331148 MALRD1Q5VYJ5 2156 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 OR11H12B2RN74 326 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 COX7A1P24310 79 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 EFNA4P52798 201 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 FHL3Q13643 280 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 NFE4Q86UQ8 179 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 OR11H1Q8NG94 326 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 OR11H2Q8NH07 326 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 DLX4Q92988 240 aaPredicted RBP13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 ZNF48Q96MX3 618 aaPredicted RBP13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 RNF5Q99942 180 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 ACACBO00763 2458 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 MT-ATP8P03928 68 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 MFAP4P55083 255 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 SMAD5-AS1Q9Y6J3 95 aa13.97□□□□□ -0.17
CLSTN3-202ENST00000331148 AGRNO00468 2067 aa13.96□□□□□ -0.17
CLSTN3-202ENST00000331148 F8W735 103 aaPredicted RBP13.96□□□□□ -0.17
CLSTN3-202ENST00000331148 ERCC8Q13216 396 aa13.96□□□□□ -0.17
CLSTN3-202ENST00000331148 ITLN2Q8WWU7 325 aaPredicted RBP13.96□□□□□ -0.17
CLSTN3-202ENST00000331148 ANKHD1Q8IWZ3 2542 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-202ENST00000331148 HIVEP3Q5T1R4 2406 aa13.96□□□□□ -0.17
CLSTN3-202ENST00000331148 PKDREJQ9NTG1 2253 aa13.96□□□□□ -0.18
CLSTN3-202ENST00000331148 TRAV26-2A0A0B4J265 109 aa13.95□□□□□ -0.18
CLSTN3-202ENST00000331148 F8VRH5 84 aa13.95□□□□□ -0.18
CLSTN3-202ENST00000331148 H7C1H1 209 aa13.95□□□□□ -0.18
CLSTN3-202ENST00000331148 IL17RELQ6ZVW7 336 aa13.95□□□□□ -0.18
CLSTN3-202ENST00000331148 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
CLSTN3-202ENST00000331148 CFHR4Q92496 578 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms