RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TMEM14CQ9P0S9 112 aa16.07■□□□□ 0.16
CMTM4-201ENST00000330687 ONECUT1Q9UBC0 465 aa16.07■□□□□ 0.16
CMTM4-201ENST00000330687 SLC25A16P16260 332 aa16.07■□□□□ 0.16
CMTM4-201ENST00000330687 LAGE3Q14657 143 aa16.07■□□□□ 0.16
CMTM4-201ENST00000330687 TTC32Q5I0X7 151 aa16.07■□□□□ 0.16
CMTM4-201ENST00000330687 PPDPFLQ8WWR9 84 aa16.07■□□□□ 0.16
CMTM4-201ENST00000330687 A8MWV9 139 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 RNF182Q8N6D2 247 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 FAM27E3Q08E93 113 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 SRSF6Q13247 344 aaKnown RBP16.06■□□□□ 0.16
CMTM4-201ENST00000330687 PLEKHB2Q96CS7 222 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 PRADC1Q9BSG0 188 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 LAMA5O15230 3695 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 CARD19Q96LW7 228 aa16.06■□□□□ 0.16
CMTM4-201ENST00000330687 ACACAQ13085 2346 aa16.05■□□□□ 0.16
CMTM4-201ENST00000330687 TNRC18O15417 2968 aaPredicted RBP16.05■□□□□ 0.16
CMTM4-201ENST00000330687 H3BRN7 92 aa16.05■□□□□ 0.16
CMTM4-201ENST00000330687 GAGE2BQ13066 116 aa16.05■□□□□ 0.16
CMTM4-201ENST00000330687 GAGE2EQ4V326 116 aa16.05■□□□□ 0.16
CMTM4-201ENST00000330687 GAGE2DQ9UEU5 116 aa16.05■□□□□ 0.16
CMTM4-201ENST00000330687 DMXL1Q9Y485 3027 aa16.05■□□□□ 0.16
CMTM4-201ENST00000330687 A0A1W2PNU3 283 aaPredicted RBP16.04■□□□□ 0.16
CMTM4-201ENST00000330687 SNCGO76070 127 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 TSPAN13O95857 204 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 Q1RN00 199 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 ANKRD29Q8N6D5 301 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 A0A087WX48 190 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 A6NJY4 79 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 C22orf34Q6ZV56 151 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 ZMAT4Q9H898 229 aa16.04■□□□□ 0.16
CMTM4-201ENST00000330687 RAI1Q7Z5J4 1906 aaPredicted RBP16.03■□□□□ 0.16
CMTM4-201ENST00000330687 TRBV7-3A0A075B6L6 115 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 C9JAW5 83 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 TCL1BO95988 128 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 LGALS1P09382 135 aaKnown RBP16.03■□□□□ 0.16
CMTM4-201ENST00000330687 FABP5P3A8MUU1 101 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 CCDC179H3BU77 68 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 M0R381 172 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 Q8N8P6 123 aa16.03■□□□□ 0.16
CMTM4-201ENST00000330687 C5orf64Q2M2E5 130 aa16.02■□□□□ 0.16
CMTM4-201ENST00000330687 Q6ZQT7 251 aa16.02■□□□□ 0.16
CMTM4-201ENST00000330687 TEN1Q86WV5 123 aa16.02■□□□□ 0.16
CMTM4-201ENST00000330687 PRSS33Q8NF86 280 aa16.02■□□□□ 0.16
CMTM4-201ENST00000330687 I3L2K1 104 aa16.02■□□□□ 0.15
CMTM4-201ENST00000330687 ZNF688P0C7X2 276 aa16.02■□□□□ 0.15
CMTM4-201ENST00000330687 HOXB4P17483 251 aaPredicted RBP16.02■□□□□ 0.15
CMTM4-201ENST00000330687 IL17RELQ6ZVW7 336 aa16.02■□□□□ 0.15
CMTM4-201ENST00000330687 INS-IGF2F8WCM5 200 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 MGPP08493 103 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 SRSF1Q07955 248 aaKnown RBP eCLIP16.01■□□□□ 0.15
CMTM4-201ENST00000330687 GATD1Q8NB37 220 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 ZFHX2Q9C0A1 2572 aaPredicted RBP16.01■□□□□ 0.15
CMTM4-201ENST00000330687 MRGPRG-AS1Q2M3A8 158 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 C1orf162Q8NEQ5 155 aaPredicted RBP16.01■□□□□ 0.15
CMTM4-201ENST00000330687 FDCSPQ8NFU4 85 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 H7C1H1 209 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 PLNP26678 52 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 TAL2Q16559 108 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 CFHR4Q92496 578 aa16.01■□□□□ 0.15
CMTM4-201ENST00000330687 TEX22C9J3V5 150 aa16■□□□□ 0.15
CMTM4-201ENST00000330687 K7EM74 188 aa16■□□□□ 0.15
CMTM4-201ENST00000330687 F8VRH5 84 aa16■□□□□ 0.15
CMTM4-201ENST00000330687 FCN3O75636 299 aa16■□□□□ 0.15
CMTM4-201ENST00000330687 K7EIM0 57 aa16■□□□□ 0.15
CMTM4-201ENST00000330687 ZNF474Q6S9Z5 364 aaPredicted RBP16■□□□□ 0.15
CMTM4-201ENST00000330687 DYNAPQ8N1N2 210 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 TRBV7-9A0A0J9YWB2 115 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 LYNX1G3V0Z9 82 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 LAMTOR5O43504 91 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 IGHV4-39P01824 125 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 LYNX1P0DP58 116 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 GFRALQ6UXV0 394 aa15.99■□□□□ 0.15
CMTM4-201ENST00000330687 TRPT1Q86TN4 253 aaKnown RBP15.99■□□□□ 0.15
CMTM4-201ENST00000330687 TRAV4A0A0B4J268 109 aa15.98■□□□□ 0.15
CMTM4-201ENST00000330687 SHISA9B4DS77 424 aa15.98■□□□□ 0.15
CMTM4-201ENST00000330687 IGHV1-8P0DP01 117 aa15.98■□□□□ 0.15
CMTM4-201ENST00000330687 IGHV3-64A0A075B6Q5 118 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 IGLC6P0CF74 106 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 TMEM155Q4W5P6 130 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 PSMG4Q5JS54 123 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 LYPD1Q8N2G4 141 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 AJUBAQ96IF1 538 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 IGHV1-3A0A0C4DH29 117 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 DYNLRB1Q9NP97 96 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
CMTM4-201ENST00000330687 TMEM170BQ5T4T1 132 aa15.96■□□□□ 0.15
CMTM4-201ENST00000330687 CRLF1O75462 422 aa15.96■□□□□ 0.15
CMTM4-201ENST00000330687 OR11H6Q8NGC7 330 aa15.96■□□□□ 0.15
CMTM4-201ENST00000330687 PIFOQ8TCI5 191 aa15.96■□□□□ 0.15
CMTM4-201ENST00000330687 GAGE12JA6NER3 117 aa15.96■□□□□ 0.14
CMTM4-201ENST00000330687 GAGE7O76087 117 aa15.96■□□□□ 0.14
CMTM4-201ENST00000330687 GAGE12FP0CL80 117 aa15.96■□□□□ 0.14
CMTM4-201ENST00000330687 GAGE12GP0CL81 117 aa15.96■□□□□ 0.14
CMTM4-201ENST00000330687 GAGE12IP0CL82 117 aa15.96■□□□□ 0.14
CMTM4-201ENST00000330687 GAGE4Q13068 117 aa15.96■□□□□ 0.14
CMTM4-201ENST00000330687 COL6A6A6NMZ7 2263 aa15.95■□□□□ 0.14
CMTM4-201ENST00000330687 CREBBPQ92793 2442 aa15.95■□□□□ 0.14
CMTM4-201ENST00000330687 CRIP2P52943 208 aaPredicted RBP15.95■□□□□ 0.14
CMTM4-201ENST00000330687 S100A4P26447 101 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms