RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
TPM3-205ENST00000328159 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 PYY3Q5JQD4 70 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 DEFB1P60022 68 aa11.27□□□□□ -0.61
TPM3-205ENST00000328159 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
TPM3-205ENST00000328159 PRR31Q5SQ13 230 aa11.27□□□□□ -0.61
TPM3-205ENST00000328159 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
TPM3-205ENST00000328159 DCANP1Q8TF63 244 aa11.27□□□□□ -0.61
TPM3-205ENST00000328159 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.61
TPM3-205ENST00000328159 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
TPM3-205ENST00000328159 C2orf70A6NJV1 201 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 LINC01619G3V211 115 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 SLURP1P55000 103 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 ZNF575Q86XF7 245 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 RNASE1P07998 156 aaKnown RBP11.26□□□□□ -0.61
TPM3-205ENST00000328159 C18orf32Q8TCD1 76 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
TPM3-205ENST00000328159 F6UB75 175 aa11.25□□□□□ -0.61
TPM3-205ENST00000328159 CTRLP40313 264 aa11.25□□□□□ -0.61
TPM3-205ENST00000328159 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
TPM3-205ENST00000328159 DPF1Q92782 380 aa11.25□□□□□ -0.61
TPM3-205ENST00000328159 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
TPM3-205ENST00000328159 LOC102724200A0A096LPH7 203 aaPredicted RBP11.24□□□□□ -0.61
TPM3-205ENST00000328159 M0QZ24 198 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 PRR9Q5T870 116 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 OR11H1Q8NG94 326 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 SMR3AQ99954 134 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 ANK3Q12955 4377 aaKnown RBP11.24□□□□□ -0.61
TPM3-205ENST00000328159 AKAP9Q99996 3911 aa11.24□□□□□ -0.61
TPM3-205ENST00000328159 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 TFPI2P48307 235 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
TPM3-205ENST00000328159 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 K7EQG2 157 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 KCNS1Q96KK3 526 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
TPM3-205ENST00000328159 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
TPM3-205ENST00000328159 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
TPM3-205ENST00000328159 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
TPM3-205ENST00000328159 JOSD1Q15040 202 aaPredicted RBP11.22□□□□□ -0.61
TPM3-205ENST00000328159 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
TPM3-205ENST00000328159 DUX3Q96PT4 197 aa11.22□□□□□ -0.61
TPM3-205ENST00000328159 PCP4L1A6NKN8 68 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 J3KRW8 73 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 LY6G6DO95868 133 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 HILS1P60008 231 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 SSTP61278 116 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 SNRPD3P62318 126 aaKnown RBP11.21□□□□□ -0.61
TPM3-205ENST00000328159 DNLZQ5SXM8 178 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 Q6ZQT7 251 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 SAMD10Q9BYL1 202 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 PEMTQ9UBM1 199 aa11.21□□□□□ -0.61
TPM3-205ENST00000328159 GPX1P07203 203 aa11.21□□□□□ -0.62
TPM3-205ENST00000328159 ZNF688P0C7X2 276 aa11.21□□□□□ -0.62
TPM3-205ENST00000328159 PSMG4Q5JS54 123 aa11.21□□□□□ -0.62
TPM3-205ENST00000328159 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.62
TPM3-205ENST00000328159 OR9G4Q8NGQ1 327 aa11.21□□□□□ -0.62
TPM3-205ENST00000328159 CNFNQ9BYD5 112 aa11.21□□□□□ -0.62
TPM3-205ENST00000328159 MTORP42345 2549 aa11.2□□□□□ -0.62
TPM3-205ENST00000328159 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
TPM3-205ENST00000328159 NTF3P20783 257 aa11.2□□□□□ -0.62
TPM3-205ENST00000328159 TWIST1Q15672 202 aa11.2□□□□□ -0.62
TPM3-205ENST00000328159 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
TPM3-205ENST00000328159 LINC01006Q8NI28 216 aa11.2□□□□□ -0.62
TPM3-205ENST00000328159 CD28P10747 220 aa11.19□□□□□ -0.62
TPM3-205ENST00000328159 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
TPM3-205ENST00000328159 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
TPM3-205ENST00000328159 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 C11orf44Q8N8P7 122 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
TPM3-205ENST00000328159 CSN3P07498 182 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 PMCHP20382 165 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 AMTP48728 403 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 Q6ZWC4 215 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 NIT1Q86X76 327 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 NAGKQ9UJ70 344 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 HIVEP2P31629 2446 aa11.18□□□□□ -0.62
TPM3-205ENST00000328159 A0A0J9YX75 114 aa11.17□□□□□ -0.62
TPM3-205ENST00000328159 CD33P20138 364 aa11.17□□□□□ -0.62
TPM3-205ENST00000328159 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
TPM3-205ENST00000328159 RNASEKQ6P5S7 137 aaKnown RBP11.17□□□□□ -0.62
TPM3-205ENST00000328159 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms