RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 S100ZQ8WXG8 99 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 ATP5SQ99766 215 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 ARPC5LQ9BPX5 153 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 SLC25A31Q9H0C2 315 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 KCNIP2Q9NS61 270 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 A0A1W2PPQ1 181 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 FFAR4Q5NUL3 377 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 PPP1R1CQ8WVI7 109 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 C8orf49Q96NF6 230 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 RPH3ALQ9UNE2 315 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 HSPB11Q9Y547 144 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 ICOSQ9Y6W8 199 aa8.46□□□□□ -1.06
TPM3-204ENST00000323144 INMT-MINDY4F8WBC2 141 aa8.45□□□□□ -1.06
TPM3-204ENST00000323144 PAX4O43316 350 aa8.45□□□□□ -1.06
TPM3-204ENST00000323144 SFTA3P0C7M3 94 aa8.45□□□□□ -1.06
TPM3-204ENST00000323144 LINC00299Q6ZSB3 139 aa8.45□□□□□ -1.06
TPM3-204ENST00000323144 MBD2Q9UBB5 411 aa8.45□□□□□ -1.06
TPM3-204ENST00000323144 F6UZH7 168 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 SIVA1O15304 175 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 PRAF2O60831 178 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 NMBP08949 121 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 CRYBA4P53673 196 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 RANP62826 216 aaKnown RBP8.44□□□□□ -1.06
TPM3-204ENST00000323144 ZNF266Q14584 549 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 NAGKQ9UJ70 344 aa8.44□□□□□ -1.06
TPM3-204ENST00000323144 DIRC3C9JPN6 131 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 C17orf112F2Z3M2 114 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 MPC2O95563 127 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 BTF3P20290 206 aaKnown RBP8.43□□□□□ -1.06
TPM3-204ENST00000323144 FHL2Q14192 279 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 TMEM183BQ1AE95 376 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 WFDC10BQ8IUB3 73 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 WFDC1Q9HC57 220 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 PTTG2Q9NZH5 202 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
TPM3-204ENST00000323144 RBAKDNA6NC62 111 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 SSNA1O43805 119 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 RAB2AP61019 212 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 GNG5P63218 68 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 Q6AWC8 147 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 HYLS1Q96M11 299 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 MARVELD1Q9BSK0 173 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
TPM3-204ENST00000323144 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
TPM3-204ENST00000323144 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
TPM3-204ENST00000323144 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
TPM3-204ENST00000323144 RPL12P30050 165 aaKnown RBP8.41□□□□□ -1.06
TPM3-204ENST00000323144 CSN1S1P47710 185 aa8.41□□□□□ -1.06
TPM3-204ENST00000323144 Q8N1X5 172 aa8.41□□□□□ -1.06
TPM3-204ENST00000323144 TRGV11A0A075B6L2 103 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 TRGV4A0A0C4DH28 118 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 LOC100131303A0A0U1RQF7 123 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 K7EQD1 137 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 PET100P0DJ07 73 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 CYCSP99999 105 aaKnown RBP8.4□□□□□ -1.06
TPM3-204ENST00000323144 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 LYPD1Q8N2G4 141 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 OR10G4Q8NGN3 311 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 TVP23CQ96ET8 276 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 OTORQ9NRC9 128 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 HHLA3Q9XRX5 114 aa8.4□□□□□ -1.06
TPM3-204ENST00000323144 A6NHS1 94 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 IFNA5P01569 189 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 TYMSP04818 313 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 GYPEP15421 78 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 TAS2R45P59539 299 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
TPM3-204ENST00000323144 IGHV3-16A0A0C4DH30 117 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 ARL14EPLP0DKL9 152 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 SRIP30626 198 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
TPM3-204ENST00000323144 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 NEGR1Q7Z3B1 354 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 SCGB1C1Q8TD33 95 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 PCNPQ8WW12 178 aaKnown RBP8.38□□□□□ -1.07
TPM3-204ENST00000323144 SGK494Q96LW2 274 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 LENEPQ9Y5L5 61 aa8.38□□□□□ -1.07
TPM3-204ENST00000323144 TRAV4A0A0B4J268 109 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 PGPA6NDG6 321 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 GNRH2O43555 120 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 TDRG1Q3Y452 100 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 TMEM75Q8N9X5 138 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 CMTM2Q8TAZ6 248 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 RASL10AQ92737 203 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 ALG5Q9Y673 324 aa8.37□□□□□ -1.07
TPM3-204ENST00000323144 ACOT6Q3I5F7 207 aaPredicted RBP8.36□□□□□ -1.07
TPM3-204ENST00000323144 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
TPM3-204ENST00000323144 HSD17B11Q8NBQ5 300 aa8.36□□□□□ -1.07
TPM3-204ENST00000323144 SPXQ9BT56 116 aa8.36□□□□□ -1.07
TPM3-204ENST00000323144 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
TPM3-204ENST00000323144 LY96Q9Y6Y9 160 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms