RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.03
TOP3A-201ENST00000321105 WIPF2Q8TF74 440 aaPredicted RBP8.59□□□□□ -1.03
TOP3A-201ENST00000321105 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
TOP3A-201ENST00000321105 NDUFAF3Q9BU61 184 aa8.59□□□□□ -1.03
TOP3A-201ENST00000321105 TEP1Q99973 2627 aaKnown RBP8.59□□□□□ -1.03
TOP3A-201ENST00000321105 IGHV3-53P01767 116 aa8.59□□□□□ -1.04
TOP3A-201ENST00000321105 LINC00322Q6ZN03 302 aaPredicted RBP8.59□□□□□ -1.04
TOP3A-201ENST00000321105 GATA1P15976 413 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-201ENST00000321105 TSPOP30536 169 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 Q6AWC8 147 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 C8orf31Q8N9H6 132 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 C10orf105Q8TEF2 133 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 NDUFS8O00217 210 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 SLC25A16P16260 332 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
TOP3A-201ENST00000321105 STPG4Q8N801 248 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
TOP3A-201ENST00000321105 EGR2P11161 476 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-201ENST00000321105 RRN3P1Q2M238 152 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 UNQ9165/PRO28630Q6UXU0 137 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 TTC9CQ8N5M4 171 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
TOP3A-201ENST00000321105 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-201ENST00000321105 TYMSP04818 313 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 ZNF418Q8TF45 676 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-201ENST00000321105 IFI27L1Q96BM0 104 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 SIRPDQ9H106 197 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 ITPR3Q14573 2671 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 MAST4O15021 2626 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 A8MWP6 167 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 SAP30O75446 220 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 ATP5L2Q7Z4Y8 100 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 C1orf159Q96HA4 380 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
TOP3A-201ENST00000321105 LINC00574Q9H8X3 128 aa8.57□□□□□ -1.04
TOP3A-201ENST00000321105 HBDP02042 147 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
TOP3A-201ENST00000321105 DSCR9P59020 149 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 C10orf99Q6UWK7 81 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 C9orf139Q6ZV77 190 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 LYPD1Q8N2G4 141 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 OR11H1Q8NG94 326 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 MIEN1Q9BRT3 115 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 PRORYQ9H606 182 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 USMG5Q96IX5 58 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-201ENST00000321105 XCL2Q9UBD3 114 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 HTN3P15516 51 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 PAX1P15863 534 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 PDE6HQ13956 83 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 RELNP78509 3460 aa8.56□□□□□ -1.04
TOP3A-201ENST00000321105 TET2Q6N021 2002 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-201ENST00000321105 LINC00173Q6ZV60 143 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 GTSF1Q8WW33 167 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 AJUBAQ96IF1 538 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 HIST1H4GQ99525 98 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 MRPL27Q9P0M9 148 aaKnown RBP8.55□□□□□ -1.04
TOP3A-201ENST00000321105 F8P00451 2351 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 EREGO14944 169 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 DNLZQ5SXM8 178 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 GTSCR1Q86UQ5 136 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 A0A087X0K7 114 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 TCTEX1D4Q5JR98 221 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 NPBQ8NG41 125 aa8.55□□□□□ -1.04
TOP3A-201ENST00000321105 FAM223BA6NKX1 122 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 GNRH2O43555 120 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 STHQ8IWL8 128 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 FAM223AQ8IWN6 122 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 C5orf56Q8N8D9 126 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 CFHR4Q92496 578 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 ZFHX4Q86UP3 3567 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 ANXA2RQ3ZCQ2 193 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 OVOL1O14753 267 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 BUB3O43684 328 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 LTAP01374 205 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 Q6ZS46 218 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-201ENST00000321105 CD300EQ496F6 205 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-201ENST00000321105 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 PYGO2Q9BRQ0 406 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 TNFRSF18Q9Y5U5 241 aa8.54□□□□□ -1.04
TOP3A-201ENST00000321105 SYS1-DBNDD2H3BUS1 97 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 NPYP01303 97 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 MRPL51Q4U2R6 128 aaKnown RBP8.53□□□□□ -1.04
TOP3A-201ENST00000321105 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 OR11H12B2RN74 326 aa8.53□□□□□ -1.04
TOP3A-201ENST00000321105 AMMECR1LQ6DCA0 310 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms