RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CFHR4Q92496 578 aa13.59□□□□□ -0.23
SMCHD1-201ENST00000320876 EFNA2O43921 213 aa13.59□□□□□ -0.23
SMCHD1-201ENST00000320876 CRYBA4P53673 196 aa13.59□□□□□ -0.23
SMCHD1-201ENST00000320876 MESP1Q9BRJ9 268 aa13.59□□□□□ -0.23
SMCHD1-201ENST00000320876 MST1LQ2TV78 715 aa13.59□□□□□ -0.23
SMCHD1-201ENST00000320876 TRBV19A0A075B6N1 114 aa13.59□□□□□ -0.23
SMCHD1-201ENST00000320876 PINLYPA6NC86 204 aa13.58□□□□□ -0.23
SMCHD1-201ENST00000320876 J3QQQ9 107 aa13.58□□□□□ -0.23
SMCHD1-201ENST00000320876 NDUFA4L2Q9NRX3 87 aa13.58□□□□□ -0.23
SMCHD1-201ENST00000320876 DSCAMO60469 2012 aa13.58□□□□□ -0.24
SMCHD1-201ENST00000320876 NBL1P41271 181 aa13.58□□□□□ -0.24
SMCHD1-201ENST00000320876 MRPL35Q9NZE8 188 aaKnown RBP13.58□□□□□ -0.24
SMCHD1-201ENST00000320876 SAA4P35542 130 aa13.58□□□□□ -0.24
SMCHD1-201ENST00000320876 TRAV26-2A0A0B4J265 109 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 IGHG2P01859 326 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 C20orf78Q9BR46 151 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 ORMDL1Q9P0S3 153 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 PAX9P55771 341 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 ZNF134P52741 427 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 PYGO2Q9BRQ0 406 aa13.57□□□□□ -0.24
SMCHD1-201ENST00000320876 C8orf86Q6ZUL3 223 aa13.56□□□□□ -0.24
SMCHD1-201ENST00000320876 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
SMCHD1-201ENST00000320876 Q6ZRM9 215 aa13.56□□□□□ -0.24
SMCHD1-201ENST00000320876 NDUFS5O43920 106 aa13.56□□□□□ -0.24
SMCHD1-201ENST00000320876 KLF5Q13887 457 aaPredicted RBP13.56□□□□□ -0.24
SMCHD1-201ENST00000320876 A0A0G2JRQ6 117 aa13.55□□□□□ -0.24
SMCHD1-201ENST00000320876 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
SMCHD1-201ENST00000320876 SPINK13Q1W4C9 94 aa13.55□□□□□ -0.24
SMCHD1-201ENST00000320876 SS18L2Q9UHA2 77 aa13.55□□□□□ -0.24
SMCHD1-201ENST00000320876 C9JQL5 133 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 DAD1P61803 113 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 ZFP36L1Q07352 338 aaKnown RBP13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 C12orf74Q32Q52 190 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 J3KT08 172 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 LINC01356Q8N9X3 169 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 RMI2Q96E14 147 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 IGHV1OR15-1A0A075B7D0 117 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 TINCRA0A1B0GVN0 87 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 NPYP01303 97 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 F5H768 121 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 OVOL3O00110 214 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 B5MCH6 92 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 PRR25Q96S07 402 aa13.54□□□□□ -0.24
SMCHD1-201ENST00000320876 ZNF833PQ6ZTB9 187 aa13.53□□□□□ -0.24
SMCHD1-201ENST00000320876 H3BQ85 93 aa13.53□□□□□ -0.24
SMCHD1-201ENST00000320876 C5orf47Q569G3 176 aa13.53□□□□□ -0.24
SMCHD1-201ENST00000320876 KLK9Q9UKQ9 250 aa13.53□□□□□ -0.24
SMCHD1-201ENST00000320876 ZC2HC1AQ96GY0 325 aa13.53□□□□□ -0.24
SMCHD1-201ENST00000320876 GATA3P23771 443 aa13.53□□□□□ -0.24
SMCHD1-201ENST00000320876 PRSS47A8MTI9 375 aa13.52□□□□□ -0.24
SMCHD1-201ENST00000320876 F6UB75 175 aa13.52□□□□□ -0.24
SMCHD1-201ENST00000320876 ATOX1O00244 68 aa13.52□□□□□ -0.24
SMCHD1-201ENST00000320876 FAM110DQ8TAY7 271 aaPredicted RBP13.52□□□□□ -0.24
SMCHD1-201ENST00000320876 FUSP35637 526 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMCHD1-201ENST00000320876 PRSS29PA6NIE9 313 aa13.52□□□□□ -0.25
SMCHD1-201ENST00000320876 ZNF493Q6ZR52 646 aa13.52□□□□□ -0.25
SMCHD1-201ENST00000320876 IGHV3-16A0A0C4DH30 117 aa13.52□□□□□ -0.25
SMCHD1-201ENST00000320876 RHOHQ15669 191 aa13.52□□□□□ -0.25
SMCHD1-201ENST00000320876 WIPF2Q8TF74 440 aaPredicted RBP13.52□□□□□ -0.25
SMCHD1-201ENST00000320876 NDUFS7O75251 213 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 LINC00205P59089 165 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 DEFB131AP59861 70 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 A0A0G2JNJ9 132 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 Q9UFV3 132 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 BAALC-AS2P0C853 105 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 APOC4P55056 127 aa13.51□□□□□ -0.25
SMCHD1-201ENST00000320876 H3BRN7 92 aa13.5□□□□□ -0.25
SMCHD1-201ENST00000320876 CLPSP04118 112 aa13.5□□□□□ -0.25
SMCHD1-201ENST00000320876 VWC2Q2TAL6 325 aa13.5□□□□□ -0.25
SMCHD1-201ENST00000320876 LTAP01374 205 aa13.5□□□□□ -0.25
SMCHD1-201ENST00000320876 CFHR3Q02985 330 aa13.5□□□□□ -0.25
SMCHD1-201ENST00000320876 SPACA3Q8IXA5 215 aa13.5□□□□□ -0.25
SMCHD1-201ENST00000320876 TET2Q6N021 2002 aaPredicted RBP13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 LINC01619G3V211 115 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 DEFB121Q5J5C9 76 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 AMTNQ6UX39 209 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 XCL2Q9UBD3 114 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 OTOGLQ3ZCN5 2332 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 ZNF581Q9P0T4 197 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 PKIGQ9Y2B9 76 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 CSPG4Q6UVK1 2322 aa13.49□□□□□ -0.25
SMCHD1-201ENST00000320876 CHKB-CPT1BH3BT56 60 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 PRRC2AP48634 2157 aaKnown RBP13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 NXPH4O95158 308 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 NDUFA4O00483 81 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 UBE2E1P51965 193 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 CRYGCP07315 174 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 CFC1BP0CG36 223 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 CFC1P0CG37 223 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 HERV-K104P63124 156 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 MLANAQ16655 118 aa13.48□□□□□ -0.25
SMCHD1-201ENST00000320876 KNCNA6PVL3 124 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 GATA4P43694 442 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 ZNRF2Q8NHG8 242 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 IGHV2-70DA0A0C4DH43 119 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms