RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RHPN1-AS1Q9BWJ2 59 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 PEF1Q9UBV8 284 aaKnown RBP5.77□□□□□ -1.49
IFT88-201ENST00000319980 A0A1B0GW15 77 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 C3orf79P0CE67 100 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 ZNF575Q86XF7 245 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 GPHB5Q86YW7 130 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 FER1L6-AS1Q8NA97 138 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 ZNF738Q8NE65 137 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 DAZ1Q9NQZ3 744 aaKnown RBP5.77□□□□□ -1.49
IFT88-201ENST00000319980 VPREB3Q9UKI3 123 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 A4D1N5 150 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 HOXA3O43365 443 aaPredicted RBP5.76□□□□□ -1.49
IFT88-201ENST00000319980 LINC00614P0C842 121 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 CTAG1AP78358 180 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 TWIST1Q15672 202 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 C9orf139Q6ZV77 190 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 LRRC75A-AS1Q8N1F1 130 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 MRPL53Q96EL3 112 aaKnown RBP5.76□□□□□ -1.49
IFT88-201ENST00000319980 C20orf173Q96LM9 149 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 DUX5Q96PT3 197 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 PRRC2AP48634 2157 aaKnown RBP5.76□□□□□ -1.49
IFT88-201ENST00000319980 SRD5A1P18405 259 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 DEFB1P60022 68 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 RPS20P60866 119 aaKnown RBP5.76□□□□□ -1.49
IFT88-201ENST00000319980 HIST2H2BCQ6DN03 193 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 Q6YL49 198 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 AMN1Q8IY45 258 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 C14orf144Q96I85 54 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 PAM16Q9Y3D7 125 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 IGHV7-4-1A0A0J9YVY3 117 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 EDN2P20800 178 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 FAM106AQ4KMX7 169 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 TEX43Q6ZNM6 134 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 Q6ZQT7 251 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 ZNF493Q6ZR52 646 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 C9orf47Q6ZRZ4 202 aa5.76□□□□□ -1.49
IFT88-201ENST00000319980 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 FAM181BA6NEQ2 426 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 ZNF561-AS1K7EIQ3 104 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 FSHBP01225 129 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 IGLC6P0CF74 106 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 Q8N976 141 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 CLEC5AQ9NY25 188 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 MSRB1Q9NZV6 116 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 ZNF469Q96JG9 3925 aaPredicted RBP5.75□□□□□ -1.49
IFT88-201ENST00000319980 CTRLP40313 264 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 FOXE3Q13461 319 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 FAM104BQ5XKR9 115 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 EBLN2Q6P2I7 272 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 CHCHD1Q96BP2 118 aaKnown RBP5.75□□□□□ -1.49
IFT88-201ENST00000319980 VAMP8Q9BV40 100 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 ZNF580Q9UK33 172 aa5.75□□□□□ -1.49
IFT88-201ENST00000319980 SONP18583 2426 aaKnown RBP5.75□□□□□ -1.49
IFT88-201ENST00000319980 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 IGHV1-24A0A0C4DH33 117 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 D6R8Y8 96 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 F6UB75 175 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 SOCS3O14543 225 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 GHRHP01286 108 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 CYB5R2Q6BCY4 276 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 SMPXQ9UHP9 88 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 TIMM8BQ9Y5J9 83 aaPredicted RBP5.74□□□□□ -1.49
IFT88-201ENST00000319980 MYO9AB2RTY4 2548 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 ATOH7Q8N100 152 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 WFDC11Q8NEX6 87 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 OR10J6PQ8NGY7 276 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 PRSS3P2Q8NHM4 247 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 SPXQ9BT56 116 aa5.74□□□□□ -1.49
IFT88-201ENST00000319980 KIR2DL5BA0A0G2JN68 375 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 KIR2DL5BA0A0G2JPC4 375 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 LOC389332A0A1B0GUA5 103 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 C2orf70A6NJV1 201 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 HIST1H1AQ02539 215 aaPredicted RBP5.73□□□□□ -1.49
IFT88-201ENST00000319980 KRTAP21-3Q3LHN1 58 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 MRPL51Q4U2R6 128 aaKnown RBP5.73□□□□□ -1.49
IFT88-201ENST00000319980 WFDC3Q8IUB2 231 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 KIR2DL5AQ8N109 375 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 NDUFAF3Q9BU61 184 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 LEPROTL1O95214 131 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 PRR9Q5T870 116 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 ORMDL3Q8N138 153 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 LINC00477Q96M19 166 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 PRELID3AQ96N28 172 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 ZNF702PQ9H963 129 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 AP5S1Q9NUS5 200 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 PPP1R14DQ9NXH3 145 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 K7EMT4 169 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 OVOL1O14753 267 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 CKS2P33552 79 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 IFI27P40305 119 aaPredicted RBP5.73□□□□□ -1.49
IFT88-201ENST00000319980 PRSS57Q6UWY2 283 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 LINC00173Q6ZV60 143 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 RAX2Q96IS3 184 aa5.73□□□□□ -1.49
IFT88-201ENST00000319980 TMEM89A2RUT3 159 aa5.72□□□□□ -1.49
IFT88-201ENST00000319980 TFPI2P48307 235 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms