RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 K7EM74 188 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 CXCL5P42830 114 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
CNOT1-201ENST00000317147 UBE2E2Q96LR5 201 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 FZR1Q9UM11 496 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 IGHV1OR15-9A0A0B4J2B8 117 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 VEGFBP49765 207 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 IGKV1-27A0A075B6S5 117 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 TRAV13-2A0A0B4J235 113 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 IGHV5-10-1A0A0J9YXX1 117 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 LYRM9A8MSI8 78 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 TGFBR3LH3BV60 316 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 RHODO00212 210 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 NBR2O15453 112 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PRR20EP86478 221 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PRR20CP86479 221 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PRR20DP86480 221 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PRR20BP86481 221 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PRR20AP86496 221 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PCOLCEQ15113 449 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 LY6G5BQ8NDX9 201 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 IMMP1LQ96LU5 166 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 A0A1B0GUS0 222 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 SPRY3O43610 288 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 CEACAM4O75871 244 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 DUSP14O95147 198 aaKnown RBP3.66□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF138P52744 262 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 HIST1H4AP62805 103 aaKnown RBP3.66□□□□□ -1.82
CNOT1-201ENST00000317147 RBM3P98179 157 aaKnown RBP3.66□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF56Q15929 161 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 A0A0J9YXY3 114 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 CMC4P56277 68 aaPredicted RBP3.66□□□□□ -1.82
CNOT1-201ENST00000317147 CFHR1Q03591 330 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 C12orf74Q32Q52 190 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 Q6ZUT4 128 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 CXorf67Q86X51 503 aaPredicted RBP3.66□□□□□ -1.82
CNOT1-201ENST00000317147 RNF152Q8N8N0 203 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 GTSF1Q8WW33 167 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 E9PLD3 99 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 C18orf15Q96N68 181 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 UBL5Q9BZL1 73 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 PLA2G2FQ9BZM2 168 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 IGLL5B9A064 214 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 F8WEM9 126 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 CD3EP07766 207 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 SLC22A18ASQ8N1D0 253 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 TP73-AS1Q9UF72 201 aa3.66□□□□□ -1.82
CNOT1-201ENST00000317147 TRBV7-1A0A0A6YYK4 115 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 MED14OSP0DP75 135 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 LY6DQ14210 128 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 TMEM240Q5SV17 173 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 NDUFA4L2Q9NRX3 87 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 WIPF3A6NGB9 483 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 NDUFA3O95167 84 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 KRTAP27-1Q3LI81 207 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 LINC00696Q6ZRV3 163 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 TRBV25-1A0A075B6N4 114 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 C16orf97H3BN30 126 aa3.65□□□□□ -1.82
CNOT1-201ENST00000317147 EGR2P11161 476 aaPredicted RBP3.65□□□□□ -1.82
CNOT1-201ENST00000317147 C17orf82Q86X59 251 aaPredicted RBP3.65□□□□□ -1.82
CNOT1-201ENST00000317147 IGKV1-12A0A0C4DH73 117 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 NDUFC2-KCTD14E9PQ53 114 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 SOCS3O14543 225 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 IGKV1D-12P01611 117 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 CCL11P51671 97 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 ZFP36L1Q07352 338 aaKnown RBP3.65□□□□□ -1.83
CNOT1-201ENST00000317147 LRRC75A-AS1Q8N1F1 130 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 IGF2BP2-AS1Q96M15 143 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 BEX4Q9NWD9 120 aaPredicted RBP3.65□□□□□ -1.83
CNOT1-201ENST00000317147 DPM3Q9P2X0 92 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 KNCNA6PVL3 124 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 H0YGX0 51 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 FOXF2Q12947 444 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 MINOS1Q5TGZ0 78 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 RASL10AQ92737 203 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 RETNQ9HD89 108 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 MINOS1-NBL1R4GNA1 71 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 OTOGQ6ZRI0 2925 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 CENPVL3A0A0U1RRI6 287 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 A0A1B0GXF2 115 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 hADV29S1A0JD25 119 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 SEC61GP60059 68 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 PLAURQ03405 335 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 Q8TCH9 128 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 SRXN1Q9BYN0 137 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 RNASE2P10153 161 aaKnown RBP3.65□□□□□ -1.83
CNOT1-201ENST00000317147 TDRG1Q3Y452 100 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 TMEM92Q6UXU6 159 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 GFRALQ6UXV0 394 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 LINC00643Q86TS7 51 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 TMEM133Q9H2Q1 129 aa3.65□□□□□ -1.83
CNOT1-201ENST00000317147 C2orf70A6NJV1 201 aa3.64□□□□□ -1.83
CNOT1-201ENST00000317147 C9JAW5 83 aa3.64□□□□□ -1.83
CNOT1-201ENST00000317147 NPFFO15130 113 aa3.64□□□□□ -1.83
CNOT1-201ENST00000317147 P0DMU3 169 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms