RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PPP1R17O96001 155 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 SMIM13P0DJ93 91 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 GATA1P15976 413 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-201ENST00000314191 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-201ENST00000314191 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 MSRB1Q9NZV6 116 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 BCL6BQ8N143 479 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-201ENST00000314191 STPG4Q8N801 248 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 IGHV1-24A0A0C4DH33 117 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 J3QLI3 93 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 IGLC2P0DOY2 106 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 IGLC3P0DOY3 106 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 PTPN13Q12923 2485 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 NAA38Q9BRA0 125 aaKnown RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 XCL2Q9UBD3 114 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 H3BUT2 72 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 TRAV12-2A0A075B6T6 113 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 CSTL1Q9H114 145 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 LINC00322Q6ZN03 302 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 J3QKU1 62 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 BUB3O43684 328 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 FOXE3Q13461 319 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 DEFB113Q30KQ7 82 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 CD300EQ496F6 205 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 CHTOPQ9Y3Y2 248 aaKnown RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 TRGV11A0A075B6L2 103 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 GNRH2O43555 120 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 HELZP42694 1942 aaKnown RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 CRYGBP07316 175 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 IGLL1P15814 213 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 LAGE3Q14657 143 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 DEFB1P60022 68 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 TCTEX1D4Q5JR98 221 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 IGLV2-8P01709 118 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 GEMIN7Q9H840 131 aaKnown RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 PCNX3Q9H6A9 2034 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 LINC01619G3V211 115 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 Q71RC1 249 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-201ENST00000314191 C20orf144Q9BQM9 153 aa4.8□□□□□ -1.64
PRKDC-201ENST00000314191 UBE2L6O14933 153 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 RIPPLY3P57055 190 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 PAPPA-AS1Q5QFB9 102 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 LINC00173Q6ZV60 143 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 NEGR1Q7Z3B1 354 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 WIPF2Q8TF74 440 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-201ENST00000314191 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 A0A1W2PPR1 153 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 RIF1Q5UIP0 2472 aaKnown RBP4.79□□□□□ -1.64
PRKDC-201ENST00000314191 APOMO95445 188 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 GTSF1Q8WW33 167 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 NHP2Q9NX24 153 aaKnown RBP4.79□□□□□ -1.64
PRKDC-201ENST00000314191 SFTA2Q6UW10 78 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 MS4A6AQ9H2W1 248 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 YPEL4Q96NS1 127 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 ELANEP08246 267 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 A0A087X0K7 114 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 UNQ9165/PRO28630Q6UXU0 137 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 DEFB136Q30KP8 78 aa4.79□□□□□ -1.64
PRKDC-201ENST00000314191 A6NDX4 124 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 SCGB1A1P11684 91 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 SIGLEC8Q9NYZ4 499 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 C2orf16Q68DN1 1984 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 ZNF124Q15973 351 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 C2orf66Q6UXQ4 117 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 OBSL1O75147 1896 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 CCDC140Q96MF4 163 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 DENND4AQ7Z401 1863 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 TRBV12-3P01733 135 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 IGHG2P01859 326 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 VPREB3Q9UKI3 123 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 SUMO2P61956 95 aaKnown RBP4.78□□□□□ -1.64
PRKDC-201ENST00000314191 Q8N8P6 123 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 RPL35AP18077 110 aaKnown RBP4.78□□□□□ -1.64
PRKDC-201ENST00000314191 ORAOV1Q8WV07 137 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 C19orf54Q5BKX5 351 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 PHLDA1Q8WV24 401 aaPredicted RBP4.78□□□□□ -1.64
PRKDC-201ENST00000314191 C2orf88Q9BSF0 95 aa4.78□□□□□ -1.64
PRKDC-201ENST00000314191 LGALS1P09382 135 aaKnown RBP4.77□□□□□ -1.65
PRKDC-201ENST00000314191 ZNF80P51504 273 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-201ENST00000314191 CD28P10747 220 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 ZNF815PA8K554 130 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 MEIG1Q5JSS6 88 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 HOXD3P31249 432 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-201ENST00000314191 SONP18583 2426 aaKnown RBP4.77□□□□□ -1.65
PRKDC-201ENST00000314191 H3BUA1 57 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 VCYO14598 125 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 FSTL3O95633 263 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 ZNF747Q9BV97 191 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 IGHV1OR15-1A0A075B7D0 117 aa4.77□□□□□ -1.65
PRKDC-201ENST00000314191 TP53TG1Q9Y2A0 90 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms