RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 RNF183Q96D59 192 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 SMDT1Q9H4I9 107 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 ZFP30Q9Y2G7 519 aa9.2□□□□□ -0.94
CHMP2A-201ENST00000312547 C7orf71A4D174 169 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 RAB19A4D1S5 217 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 INSP01308 110 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 PEA15Q15121 130 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 ZNF705AQ6ZN79 300 aaPredicted RBP9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 C8orf49Q96NF6 230 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 C20orf144Q9BQM9 153 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 OVOL2Q9BRP0 275 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 NDFIP1Q9BT67 221 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 MLST8Q9BVC4 326 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 TREM1Q9NP99 234 aa9.19□□□□□ -0.94
CHMP2A-201ENST00000312547 TRBV20OR9-2A0A075B6H5 130 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 LINC00862A6NCI5 91 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 SPRY2O43597 315 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 ZNF324O75467 553 aaPredicted RBP9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 GPX1P07203 203 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 BTN1A1Q13410 526 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 Q6AWC8 147 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 TMEM183AQ8IXX5 376 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 SPATA25Q9BR10 227 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 PARLQ9H300 379 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 RETNQ9HD89 108 aa9.18□□□□□ -0.94
CHMP2A-201ENST00000312547 HUWE1Q7Z6Z7 4374 aaKnown RBP9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 J3KRW8 73 aa9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 NHLRC4P0CG21 123 aaPredicted RBP9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 ZNF80P51504 273 aaPredicted RBP9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 Q6ZQT7 251 aa9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 BAGE2Q86Y30 109 aa9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 X6R8D5 127 aa9.17□□□□□ -0.94
CHMP2A-201ENST00000312547 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 C9JCJ5 164 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 GCGP01275 180 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 CRIP1P50238 77 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 SMUG1Q53HV7 270 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 CENPWQ5EE01 88 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 NEU1Q99519 415 aa9.16□□□□□ -0.94
CHMP2A-201ENST00000312547 COL7A1Q02388 2944 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 H7BYZ3 331 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 GNG4P50150 75 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 OR11H2Q8NH07 326 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 LINC00467Q9BRT7 94 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 NIPSNAP3BQ9BS92 247 aa9.15□□□□□ -0.94
CHMP2A-201ENST00000312547 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 PFN1P07737 140 aaKnown RBP9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 CEBPGP53567 150 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 ZNF674Q2M3X9 581 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 UQCC3Q6UW78 93 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 LINC01587Q99440 93 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 ZMAT4Q9H898 229 aa9.14□□□□□ -0.95
CHMP2A-201ENST00000312547 IGHV3OR16-12A0A075B7B8 117 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 PGPEP1LA6NFU8 196 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 FAM74A3Q4VXF1 159 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 COMMD7Q86VX2 200 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 Q8NAQ8 132 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 SMIM7Q9BQ49 75 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 TMEM208Q9BTX3 173 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 C11orf21Q9P2W6 132 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
CHMP2A-201ENST00000312547 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 IGHV1OR15-1A0A075B7D0 117 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 ZNF705GA8MUZ8 300 aaPredicted RBP9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 PRM2P04554 102 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 MIFP14174 115 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 SOHLH1Q5JUK2 328 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
CHMP2A-201ENST00000312547 K7EN84 100 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 SH2D1AO60880 128 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 SFTA3P0C7M3 94 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 AZU1P20160 251 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 RRN3P1Q2M238 152 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 FAM162BQ5T6X4 162 aa9.11□□□□□ -0.95
CHMP2A-201ENST00000312547 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 IGHV4-28A0A0C4DH34 117 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 C19orf71A6NCJ1 209 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 MGST1P10620 155 aaKnown RBP9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 MUC21Q5SSG8 566 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 LINC01551Q86U37 167 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 ZNF575Q86XF7 245 aa9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
CHMP2A-201ENST00000312547 TMEM218A2RU14 115 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms