RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 DPM2O94777 84 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 C1orf122Q6ZSJ8 110 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 ZNF833PQ6ZTB9 187 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 OR9G4Q8NGQ1 327 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 SCGB3A1Q96QR1 104 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 PTPRBP23467 1997 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 LTAP01374 205 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 FXYD2P54710 66 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 CKS1BP61024 79 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 WFDC2Q14508 124 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 TMEM8BA6NDV4 472 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 H3BRM9 83 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 IGHV3-11P01762 117 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 EFNA4P52798 201 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 KLF5Q13887 457 aaPredicted RBP10□□□□□ -0.81
RETREG3-201ENST00000309428 MBD6Q96DN6 1003 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 C16orf92Q96LL3 132 aa10□□□□□ -0.81
RETREG3-201ENST00000309428 RNF182Q8N6D2 247 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 NUP37Q8NFH4 326 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 ANKRD17O75179 2603 aaKnown RBP9.99□□□□□ -0.81
RETREG3-201ENST00000309428 NDPQ00604 133 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 TEX36Q5VZQ5 186 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
RETREG3-201ENST00000309428 HRNRQ86YZ3 2850 aaPredicted RBP9.98□□□□□ -0.81
RETREG3-201ENST00000309428 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 G3V318 75 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 SRD5A1P18405 259 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 DLX6P56179 175 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 TRGV9Q99603 122 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 DOPEY1Q5JWR5 2465 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 K7ENP7 123 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 CEACAM3P40198 252 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
RETREG3-201ENST00000309428 NRGNQ92686 78 aa9.98□□□□□ -0.81
RETREG3-201ENST00000309428 FABP5P3A8MUU1 101 aa9.97□□□□□ -0.81
RETREG3-201ENST00000309428 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
RETREG3-201ENST00000309428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.97□□□□□ -0.81
RETREG3-201ENST00000309428 PRTN3P24158 256 aa9.97□□□□□ -0.81
RETREG3-201ENST00000309428 ATP5G2Q06055 141 aa9.97□□□□□ -0.81
RETREG3-201ENST00000309428 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
RETREG3-201ENST00000309428 MRPL35Q9NZE8 188 aaKnown RBP9.97□□□□□ -0.81
RETREG3-201ENST00000309428 ZNF815PA8K554 130 aa9.96□□□□□ -0.81
RETREG3-201ENST00000309428 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.81
RETREG3-201ENST00000309428 FNDC10F2Z333 226 aa9.96□□□□□ -0.81
RETREG3-201ENST00000309428 DEFB1P60022 68 aa9.96□□□□□ -0.81
RETREG3-201ENST00000309428 Q6AWC8 147 aa9.96□□□□□ -0.81
RETREG3-201ENST00000309428 VGLL1Q99990 258 aa9.96□□□□□ -0.81
RETREG3-201ENST00000309428 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 IGLV2-23P01705 113 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 FOXE3Q13461 319 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 LINC01545Q5VT33 79 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 NEGR1Q7Z3B1 354 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 VMO1Q7Z5L0 202 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
RETREG3-201ENST00000309428 TRBV19A0A075B6N1 114 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 IGKV1D-37A0A075B6S9 117 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 HAX1O00165 279 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 NBR2O15453 112 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 BPESC1Q9GZL8 116 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 DUX5Q96PT3 197 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 PRRC2AP48634 2157 aaKnown RBP9.95□□□□□ -0.82
RETREG3-201ENST00000309428 ATP5LO75964 103 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
RETREG3-201ENST00000309428 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
RETREG3-201ENST00000309428 CSMD2Q7Z408 3487 aa9.94□□□□□ -0.82
RETREG3-201ENST00000309428 NDUFS8O00217 210 aa9.94□□□□□ -0.82
RETREG3-201ENST00000309428 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
RETREG3-201ENST00000309428 GNLYP22749 145 aa9.94□□□□□ -0.82
RETREG3-201ENST00000309428 DYNAPQ8N1N2 210 aa9.94□□□□□ -0.82
RETREG3-201ENST00000309428 ZNF492Q9P255 531 aa9.94□□□□□ -0.82
RETREG3-201ENST00000309428 RAB9AP51151 201 aa9.94□□□□□ -0.82
RETREG3-201ENST00000309428 PPBPP02775 128 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 EGR2P11161 476 aaPredicted RBP9.93□□□□□ -0.82
RETREG3-201ENST00000309428 RPS20P60866 119 aaKnown RBP9.93□□□□□ -0.82
RETREG3-201ENST00000309428 HIST2H2BDQ6DRA6 164 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 RAX2Q96IS3 184 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 TRAV8-2A0A0B4J237 113 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 A6NJY4 79 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 GP9P14770 177 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 HERVK_113P61574 105 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
RETREG3-201ENST00000309428 SYT8Q8NBV8 401 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 A0A1B0GW15 77 aa9.93□□□□□ -0.82
RETREG3-201ENST00000309428 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
RETREG3-201ENST00000309428 TRBV25-1A0A075B6N4 114 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 LINC01548A6NM66 108 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 NPC2P61916 151 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 KLRB1Q12918 225 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 CT83Q5H943 113 aa9.92□□□□□ -0.82
RETREG3-201ENST00000309428 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms