RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 ZNF767PQ75MW2 155 aa12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 LINC00467Q9BRT7 94 aa12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 TEX48A0A1B0GUV7 120 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 SMUG1Q53HV7 270 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 Q6AWC8 147 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 PRNTQ86SH4 94 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 Q8NAQ8 132 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 IL17DQ8TAD2 202 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 C2CD4CQ8TF44 421 aa12.96□□□□□ -0.33
SSSCA1-201ENST00000309328 STAB2Q8WWQ8 2551 aa12.95□□□□□ -0.34
SSSCA1-201ENST00000309328 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
SSSCA1-201ENST00000309328 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
SSSCA1-201ENST00000309328 Q86TA4 180 aa12.95□□□□□ -0.34
SSSCA1-201ENST00000309328 TRAV21A0A0B4J279 112 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 IGHV4-28A0A0C4DH34 117 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 SCO2A0A1W2PP80 73 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 RBFOX3A6NFN3 312 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 J3KRW8 73 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 ZNF324O75467 553 aaPredicted RBP12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 C16orf74Q96GX8 76 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 WWC2-AS2Q96NR7 200 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 EDA2RQ9HAV5 297 aa12.94□□□□□ -0.34
SSSCA1-201ENST00000309328 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 LTAP01374 205 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 ZNF506Q5JVG8 444 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 TMEM263Q8WUH6 116 aaKnown RBP12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 SMIM12Q96EX1 92 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 LINC00479Q96M42 142 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 FAM210AQ96ND0 272 aa12.93□□□□□ -0.34
SSSCA1-201ENST00000309328 TRAV34A0A0B4J273 112 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 A0A0J9YWU9 116 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 RGS13O14921 159 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 RBMY1A1P0DJD3 496 aaKnown RBP12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 RBMY1CP0DJD4 496 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 RBMY1FQ15415 496 aaKnown RBP12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 ANXA2RQ3ZCQ2 193 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 EIF4E3Q8N5X7 224 aaKnown RBP12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 TVP23CQ96ET8 276 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 SGK494Q96LW2 274 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 EIF5A2Q9GZV4 153 aaKnown RBP12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
SSSCA1-201ENST00000309328 TENM3Q9P273 2699 aa12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 RPL35P42766 123 aaKnown RBP12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 FAM159AQ6UWV7 190 aa12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 TMEM183AQ8IXX5 376 aa12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 KCNS1Q96KK3 526 aa12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 MED9Q9NWA0 146 aa12.91□□□□□ -0.34
SSSCA1-201ENST00000309328 GCGP01275 180 aa12.9□□□□□ -0.34
SSSCA1-201ENST00000309328 TDRG1Q3Y452 100 aa12.9□□□□□ -0.34
SSSCA1-201ENST00000309328 PRR9Q5T870 116 aa12.9□□□□□ -0.34
SSSCA1-201ENST00000309328 CBY3A6NI87 242 aa12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 ZNF705GA8MUZ8 300 aaPredicted RBP12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 IBA57Q5T440 356 aaKnown RBP12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 BAGE2Q86Y30 109 aa12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 RNASE8Q8TDE3 154 aaKnown RBP12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 BIN3Q9NQY0 253 aa12.89□□□□□ -0.35
SSSCA1-201ENST00000309328 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 LYRM9A8MSI8 78 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 HTN1P15515 57 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 FAM162BQ5T6X4 162 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 C8orf49Q96NF6 230 aa12.88□□□□□ -0.35
SSSCA1-201ENST00000309328 GNG4P50150 75 aa12.87□□□□□ -0.35
SSSCA1-201ENST00000309328 PEA15Q15121 130 aa12.87□□□□□ -0.35
SSSCA1-201ENST00000309328 CLLU1Q5K131 121 aa12.87□□□□□ -0.35
SSSCA1-201ENST00000309328 C11orf45Q8TAV5 145 aa12.87□□□□□ -0.35
SSSCA1-201ENST00000309328 SDF2L1Q9HCN8 221 aa12.87□□□□□ -0.35
SSSCA1-201ENST00000309328 TIMM8BQ9Y5J9 83 aaPredicted RBP12.87□□□□□ -0.35
SSSCA1-201ENST00000309328 CXorf65A6NEN9 183 aa12.86□□□□□ -0.35
SSSCA1-201ENST00000309328 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
SSSCA1-201ENST00000309328 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
SSSCA1-201ENST00000309328 C9JCJ5 164 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 ZNF415Q09FC8 603 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 DAZ2Q13117 558 aaKnown RBP12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 ZNF674Q2M3X9 581 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 CENPWQ5EE01 88 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 DKK2Q9UBU2 259 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
SSSCA1-201ENST00000309328 DEFB4AO15263 64 aa12.84□□□□□ -0.35
SSSCA1-201ENST00000309328 EMP1P54849 157 aa12.84□□□□□ -0.35
SSSCA1-201ENST00000309328 DERL1Q9BUN8 251 aa12.84□□□□□ -0.35
SSSCA1-201ENST00000309328 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
SSSCA1-201ENST00000309328 AZU1P20160 251 aa12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 TCL1AP56279 114 aa12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 IFITM2Q01629 132 aa12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 MUC21Q5SSG8 566 aa12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 MUC7Q8TAX7 377 aa12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 PCNPQ8WW12 178 aaKnown RBP12.83□□□□□ -0.36
SSSCA1-201ENST00000309328 SPXQ9BT56 116 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms