RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 J3KRW8 73 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 KLRD1Q13241 179 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 WFDC2Q14508 124 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 SPANXN1Q5VSR9 72 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 Q6ZS92 163 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 NAV2Q8IVL1 2488 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 MTORP42345 2549 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 IGHV3-49A0A0A0MS15 119 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 CEACAM3P40198 252 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 LCNL1Q6ZST4 164 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 CEND1Q8N111 149 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 TMEM190Q8WZ59 177 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 WI2-2373I1.2A0A1W2PRP0 233 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 ZNF562Q6V9R5 426 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 SH2D6Q7Z4S9 175 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 ARPC1AQ92747 370 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 TRAV26-2A0A0B4J265 109 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 PSMG4Q5JS54 123 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 RNF182Q8N6D2 247 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
PTPN7-201ENST00000309017 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
PTPN7-201ENST00000309017 CD3EP07766 207 aa8.69□□□□□ -1.02
PTPN7-201ENST00000309017 DTX2Q86UW9 622 aa8.69□□□□□ -1.02
PTPN7-201ENST00000309017 SFTA2Q6UW10 78 aa8.69□□□□□ -1.02
PTPN7-201ENST00000309017 RNF5Q99942 180 aa8.69□□□□□ -1.02
PTPN7-201ENST00000309017 SRSF8Q9BRL6 282 aaKnown RBP8.69□□□□□ -1.02
PTPN7-201ENST00000309017 AGRNO00468 2067 aa8.69□□□□□ -1.02
PTPN7-201ENST00000309017 C5orf64Q2M2E5 130 aa8.69□□□□□ -1.02
PTPN7-201ENST00000309017 TNFRSF13BO14836 293 aaPredicted RBP8.68□□□□□ -1.02
PTPN7-201ENST00000309017 LY6HO94772 140 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 IL17RELQ6ZVW7 336 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 DYNAPQ8N1N2 210 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 RNF185Q96GF1 192 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 HIGD1BQ9P298 99 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 SMPXQ9UHP9 88 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
PTPN7-201ENST00000309017 A0A1B0GWB2 263 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 OR11H12B2RN74 326 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 EFNA4P52798 201 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 OR11H1Q8NG94 326 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 OR11H2Q8NH07 326 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 HHLA3Q9XRX5 114 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 ABCA12Q86UK0 2595 aa8.68□□□□□ -1.02
PTPN7-201ENST00000309017 IGLL5B9A064 214 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 LAGE3Q14657 143 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 TMEM78Q5T7P6 136 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 FANCD2OSQ96PS1 177 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
PTPN7-201ENST00000309017 B9A039 149 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 PRAC2D3DTV9 90 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 TRGV3P03979 118 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 Q8N8P6 123 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.67□□□□□ -1.02
PTPN7-201ENST00000309017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
PTPN7-201ENST00000309017 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 CD300EQ496F6 205 aaPredicted RBP8.67□□□□□ -1.02
PTPN7-201ENST00000309017 Q5PR19 223 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 CFHR4Q92496 578 aa8.67□□□□□ -1.02
PTPN7-201ENST00000309017 A0A1B0GV72 72 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 LOC107984156A0A0G2JMH3 177 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 SHISA9B4DS77 424 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 F8W1H4 67 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 IGFL3Q6UXB1 125 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 ARL17AQ8IVW1 177 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 MAPKAPK5-AS1Q8N8E1 139 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 LINC01560Q8TB33 94 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 IGLV11-55A0A075B6I3 123 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
PTPN7-201ENST00000309017 PAX8Q06710 450 aa8.66□□□□□ -1.02
PTPN7-201ENST00000309017 SRSF9Q13242 221 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPN7-201ENST00000309017 ARL3P36405 182 aa8.65□□□□□ -1.02
PTPN7-201ENST00000309017 NDPQ00604 133 aa8.65□□□□□ -1.02
PTPN7-201ENST00000309017 TIMD4Q96H15 378 aa8.65□□□□□ -1.02
PTPN7-201ENST00000309017 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.02
PTPN7-201ENST00000309017 M0R381 172 aa8.65□□□□□ -1.03
PTPN7-201ENST00000309017 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.03
PTPN7-201ENST00000309017 SPOCK3Q9BQ16 436 aa8.65□□□□□ -1.03
PTPN7-201ENST00000309017 FAM90A27PA6NNH2 459 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 H3BVH4 76 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPN7-201ENST00000309017 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 ZNF672Q499Z4 452 aaPredicted RBP8.64□□□□□ -1.03
PTPN7-201ENST00000309017 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 E9PLD3 99 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 CLEC3BP05452 202 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 CTSGP08311 255 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 ZNF502Q8TBZ5 544 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 SMAD5-AS1Q9Y6J3 95 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 NOTCH3Q9UM47 2321 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 MGPP08493 103 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 C15orf32Q32M92 178 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 VKORC1Q9BQB6 163 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms