RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SHANK2-AS3Q9BTD1 123 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 TEX36Q5VZQ5 186 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 SIGLEC15Q6ZMC9 328 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 K7EIM0 57 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 TRGV3P03979 118 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
PTPN9-201ENST00000306726 THAP8Q8NA92 274 aa11.41□□□□□ -0.58
PTPN9-201ENST00000306726 USP24Q9UPU5 2620 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 A0A1B0GWB2 263 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 MRPL35Q9NZE8 188 aaKnown RBP11.4□□□□□ -0.58
PTPN9-201ENST00000306726 J3QKU1 62 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 TMEM78Q5T7P6 136 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 PRB1P04280 392 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 DYNAPQ8N1N2 210 aa11.4□□□□□ -0.58
PTPN9-201ENST00000306726 TEX22C9J3V5 150 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 HAX1O00165 279 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 C2orf91Q6ZV80 131 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 SPOCK3Q9BQ16 436 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 TNFRSF6BO95407 300 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 ATP5IP56385 69 aaPredicted RBP11.39□□□□□ -0.59
PTPN9-201ENST00000306726 CR1LQ2VPA4 569 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 ADAMTSL5Q6ZMM2 481 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 C14orf178Q8N769 122 aaPredicted RBP11.39□□□□□ -0.59
PTPN9-201ENST00000306726 PRSS22Q9GZN4 317 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 F6UB75 175 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 APOBEC3AP31941 199 aaPredicted RBP11.39□□□□□ -0.59
PTPN9-201ENST00000306726 WFDC2Q14508 124 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
PTPN9-201ENST00000306726 HIVEP2P31629 2446 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 MRPL52Q86TS9 123 aaKnown RBP11.38□□□□□ -0.59
PTPN9-201ENST00000306726 PRR25Q96S07 402 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 C7orf69Q9H7B7 122 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 LINC01545Q5VT33 79 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 SRSF8Q9BRL6 282 aaKnown RBP11.38□□□□□ -0.59
PTPN9-201ENST00000306726 IGLV2-11P01706 119 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 BRD3OSQ6XYD6 125 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 MS4A6AQ9H2W1 248 aa11.38□□□□□ -0.59
PTPN9-201ENST00000306726 I3L2K1 104 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 TSSC4Q9Y5U2 329 aaPredicted RBP11.37□□□□□ -0.59
PTPN9-201ENST00000306726 C9orf118A6NHY6 69 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 BMI1P35226 326 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
PTPN9-201ENST00000306726 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 FABP5P3A8MUU1 101 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 IGKCP01834 107 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 IGF1P05019 195 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 CEACAM3P40198 252 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 HSD52Q0P140 79 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 KLF12Q9Y4X4 402 aa11.37□□□□□ -0.59
PTPN9-201ENST00000306726 SAMD13Q5VXD3 122 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 ZNF479Q96JC4 524 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 PSMB2P49721 201 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 Q1RN00 199 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 ZNF492Q9P255 531 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 SEC11AP67812 179 aa11.36□□□□□ -0.59
PTPN9-201ENST00000306726 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
PTPN9-201ENST00000306726 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-201ENST00000306726 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
PTPN9-201ENST00000306726 MYCNOSP40205 109 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 ATP5G2Q06055 141 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 CFHR4Q92496 578 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 ZNF256Q9Y2P7 627 aaPredicted RBP11.35□□□□□ -0.59
PTPN9-201ENST00000306726 PLA2G2AP14555 144 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 C5orf64Q2M2E5 130 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 DTX2Q86UW9 622 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 SCGB3A1Q96QR1 104 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 PAX2Q02962 417 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 CSTL1Q9H114 145 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 NPC2P61916 151 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
PTPN9-201ENST00000306726 SCGB2A1O75556 95 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 FSTL3O95633 263 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 A0A1W2PPM0 123 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 A0A087WWL8 130 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 OR11H12B2RN74 326 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 H3BRN7 92 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 PF4V1P10720 104 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 DLX6P56179 175 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 RAB1BQ9H0U4 201 aa11.34□□□□□ -0.59
PTPN9-201ENST00000306726 DPM2O94777 84 aa11.33□□□□□ -0.6
PTPN9-201ENST00000306726 EPG5Q9HCE0 2579 aa11.33□□□□□ -0.6
PTPN9-201ENST00000306726 B9A039 149 aa11.33□□□□□ -0.6
PTPN9-201ENST00000306726 VMO1Q7Z5L0 202 aa11.33□□□□□ -0.6
PTPN9-201ENST00000306726 ACANP16112 2415 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
PTPN9-201ENST00000306726 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms