RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MRAPQ8TCY5 172 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 NDUFAF3Q9BU61 184 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 FOXE3Q13461 319 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 LINC00518Q8N0U6 118 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV2D-24A0A075B6R9 120 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 C1QL4Q86Z23 238 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 PRSS29PA6NIE9 313 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 ANGP03950 147 aaKnown RBP6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 PFN1P07737 140 aaKnown RBP6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 WDR83OSQ9Y284 106 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 PCP4P48539 62 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 QRFPP83859 136 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 NMSQ5H8A3 153 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 COX11Q9Y6N1 276 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 EGR2P11161 476 aaPredicted RBP6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 SCRT2Q9NQ03 307 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 TRAV1-1A0A0B4J248 108 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV1D-13A0A0B4J2D9 117 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV1-13P0DP09 117 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 ADORA2A-AS1P86434 159 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 CARHSP1Q9Y2V2 147 aaKnown RBP6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 A0A087WWL8 130 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 VOPP1Q96AW1 172 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 NDUFB1O75438 58 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 CFHR3Q02985 330 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 C10orf105Q8TEF2 133 aa6.68□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE12BA1L429 117 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE7O76087 117 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 NCR2O95944 276 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE12FP0CL80 117 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE12GP0CL81 117 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE12IP0CL82 117 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 IGLV3-1P01715 115 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 LYPD2Q6UXB3 125 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 SELLP14151 372 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 PFN2P35080 140 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 IGF2BP2-AS1Q96M15 143 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 MUC4Q99102 2169 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 TRAV5A0A0B4J249 113 aa6.67□□□□□ -1.34
PCDHB1-201ENST00000306549 LOXP28300 417 aaPredicted RBP6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 TM2D2Q9BX73 214 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 A0A0A6YYD4 124 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 TMEM258P61165 79 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 BCL6BQ8N143 479 aaPredicted RBP6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 SELENOKQ9Y6D0 94 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 CDKN1BP46527 198 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 TMEM14EPQ6UXP3 125 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 POU2AF1Q16633 256 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 Q71RC1 249 aaPredicted RBP6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 COL4A2P08572 1712 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 IGHV1OR15-1A0A075B7D0 117 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 IFITM3Q01628 133 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 RHOHQ15669 191 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 IGHV1-24A0A0C4DH33 117 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 PAX9P55771 341 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 Q6ZWC4 215 aa6.66□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV1OR2-108A0A075B7D4 117 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 SPINK13Q1W4C9 94 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 UTF1Q5T230 341 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE6Q13070 117 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 ZNF843Q8N446 348 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 STPG4Q8N801 248 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 HAMPP81172 84 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 TIRAPP58753 221 aa6.65□□□□□ -1.34
PCDHB1-201ENST00000306549 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 WT1P19544 449 aaPredicted RBP6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 C10orf55Q5SWW7 151 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 Q8NA96 180 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 HERVK_113P63121 156 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 Q8TAT8 98 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 NDUFA4L2Q9NRX3 87 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 LY96Q9Y6Y9 160 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 IGKV1-5P01602 117 aa6.65□□□□□ -1.35
PCDHB1-201ENST00000306549 SEC61GP60059 68 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 IGFBPL1Q8WX77 278 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 GFRA4Q9GZZ7 299 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 COL4A3Q01955 1670 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 C15orf62A8K5M9 175 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 IGHG4P01861 327 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 FHL1Q13642 323 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 KRTAP27-1Q3LI81 207 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 Q6ZR03 302 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 LENEPQ9Y5L5 61 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 H3BQ85 93 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 CD300CQ08708 224 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 ZNRF2Q8NHG8 242 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 HOXB4P17483 251 aaPredicted RBP6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 FAM120AOSQ5T036 256 aa6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 NDUFS6O75380 124 aaKnown RBP6.64□□□□□ -1.35
PCDHB1-201ENST00000306549 RUSC1-AS1Q66K80 236 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms