RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 IGLC3P0DOY3 106 aa16.47■□□□□ 0.23
LTBP3-201ENST00000301873 ZNF625Q96I27 306 aaPredicted RBP16.47■□□□□ 0.23
LTBP3-201ENST00000301873 PRSS33Q8NF86 280 aa16.47■□□□□ 0.23
LTBP3-201ENST00000301873 PLEKHB2Q96CS7 222 aa16.47■□□□□ 0.23
LTBP3-201ENST00000301873 K7EN84 100 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 ALPK3Q96L96 1907 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 INSP01308 110 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 IGLL1P15814 213 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 UBE2V1Q13404 147 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 COL4A4P53420 1690 aaPredicted RBP16.46■□□□□ 0.23
LTBP3-201ENST00000301873 PAX4O43316 350 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 FAM120AOSQ5T036 256 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 IGFL2Q6UWQ7 119 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 THAP8Q8NA92 274 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 DSCAML1Q8TD84 2053 aa16.46■□□□□ 0.23
LTBP3-201ENST00000301873 KIF26AQ9ULI4 1882 aaPredicted RBP16.46■□□□□ 0.22
LTBP3-201ENST00000301873 TMEM86BQ8N661 226 aa16.46■□□□□ 0.22
LTBP3-201ENST00000301873 CHAC1Q9BUX1 264 aa16.46■□□□□ 0.22
LTBP3-201ENST00000301873 ABCA12Q86UK0 2595 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 SMIM27A0A1W2PRY6 76 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 VWC2Q2TAL6 325 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 IGHV3-16A0A0C4DH30 117 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 ANXA2RQ3ZCQ2 193 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 TMEM14CQ9P0S9 112 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 IGHV2-70P01814 119 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 Q5PR19 223 aa16.45■□□□□ 0.22
LTBP3-201ENST00000301873 TCTEX1D4Q5JR98 221 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 TP53TG1Q9Y2A0 90 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 LHBP01229 141 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 ESDP10768 282 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 PGPEP1Q9NXJ5 209 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 CR1LQ2VPA4 569 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 NEGR1Q7Z3B1 354 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 CD5LO43866 347 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 GATA3P23771 443 aa16.44■□□□□ 0.22
LTBP3-201ENST00000301873 NBL1P41271 181 aa16.43■□□□□ 0.22
LTBP3-201ENST00000301873 NPYP01303 97 aa16.43■□□□□ 0.22
LTBP3-201ENST00000301873 CMC4P56277 68 aaPredicted RBP16.43■□□□□ 0.22
LTBP3-201ENST00000301873 LY6G5BQ8NDX9 201 aa16.43■□□□□ 0.22
LTBP3-201ENST00000301873 CHD8Q9HCK8 2581 aa16.43■□□□□ 0.22
LTBP3-201ENST00000301873 GAGE12BA1L429 117 aa16.43■□□□□ 0.22
LTBP3-201ENST00000301873 ANKRD11Q6UB99 2663 aaPredicted RBP16.43■□□□□ 0.22
LTBP3-201ENST00000301873 IGHV1-24A0A0C4DH33 117 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 MTURNQ8N3F0 131 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 SIGLEC8Q9NYZ4 499 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 SDHAF1A6NFY7 115 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 CKS1BP61024 79 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 C6orf226Q5I0X4 101 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 PRIMA1Q86XR5 153 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 CRPP02741 224 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 KRTAP27-1Q3LI81 207 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 MORN5Q5VZ52 161 aa16.42■□□□□ 0.22
LTBP3-201ENST00000301873 F6UB75 175 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 NUP210Q8TEM1 1887 aaPredicted RBP16.41■□□□□ 0.22
LTBP3-201ENST00000301873 SPRY4Q9C004 299 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 COL4A3Q01955 1670 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.41■□□□□ 0.22
LTBP3-201ENST00000301873 NDUFA4O00483 81 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 DTX2Q86UW9 622 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 SIGMAR1Q99720 223 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 C1QTNF4Q9BXJ3 329 aa16.41■□□□□ 0.22
LTBP3-201ENST00000301873 TIMM21Q9BVV7 248 aa16.4■□□□□ 0.22
LTBP3-201ENST00000301873 CDPF1Q6NVV7 123 aa16.4■□□□□ 0.22
LTBP3-201ENST00000301873 SEM1Q6ZVN7 128 aa16.4■□□□□ 0.22
LTBP3-201ENST00000301873 SPRY2O43597 315 aa16.4■□□□□ 0.22
LTBP3-201ENST00000301873 SLC25A20O43772 301 aa16.4■□□□□ 0.22
LTBP3-201ENST00000301873 COX11Q9Y6N1 276 aa16.4■□□□□ 0.22
LTBP3-201ENST00000301873 IGKV1-17P01599 117 aa16.39■□□□□ 0.22
LTBP3-201ENST00000301873 CFHR3Q02985 330 aa16.39■□□□□ 0.22
LTBP3-201ENST00000301873 C1orf122Q6ZSJ8 110 aa16.39■□□□□ 0.21
LTBP3-201ENST00000301873 Q96MF0 132 aa16.39■□□□□ 0.21
LTBP3-201ENST00000301873 JPT2Q9H910 190 aa16.39■□□□□ 0.21
LTBP3-201ENST00000301873 GATD1Q8NB37 220 aa16.39■□□□□ 0.21
LTBP3-201ENST00000301873 RITA1Q96K30 269 aa16.39■□□□□ 0.21
LTBP3-201ENST00000301873 AGPAT4-IT1Q9H0P7 198 aa16.39■□□□□ 0.21
LTBP3-201ENST00000301873 MSMPQ1L6U9 139 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 TRPT1Q86TN4 253 aaKnown RBP16.38■□□□□ 0.21
LTBP3-201ENST00000301873 Q8N8P6 123 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 TCF15Q12870 199 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 RASL10AQ92737 203 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 MRPL35Q9NZE8 188 aaKnown RBP16.38■□□□□ 0.21
LTBP3-201ENST00000301873 ATXN8Q156A1 80 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 S100A7L2Q5SY68 101 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 PCNTO95613 3336 aa16.38■□□□□ 0.21
LTBP3-201ENST00000301873 IGHV1OR15-1A0A075B7D0 117 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 GAGE12JA6NER3 117 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 GAGE1Q13065 139 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 GAGE4Q13068 117 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 GAGE5Q13069 117 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 CDKN1BP46527 198 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 DYNAPQ8N1N2 210 aa16.37■□□□□ 0.21
LTBP3-201ENST00000301873 DLX4Q92988 240 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-201ENST00000301873 PATE2Q6UY27 113 aa16.36■□□□□ 0.21
LTBP3-201ENST00000301873 EGR2P11161 476 aaPredicted RBP16.36■□□□□ 0.21
LTBP3-201ENST00000301873 FN1P02751 2386 aaKnown RBP16.35■□□□□ 0.21
LTBP3-201ENST00000301873 IGHV3-38A0A0C4DH36 116 aa16.35■□□□□ 0.21
LTBP3-201ENST00000301873 C2orf16Q68DN1 1984 aa16.35■□□□□ 0.21
LTBP3-201ENST00000301873 MAJINQ3KP22 176 aa16.35■□□□□ 0.21
LTBP3-201ENST00000301873 SMIM2Q9BVW6 85 aa16.34■□□□□ 0.21
LTBP3-201ENST00000301873 SPTBN4Q9H254 2564 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms