RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 M0R3E3 92 aa12.18□□□□□ -0.46
UBAP1-201ENST00000297661 HES1Q14469 280 aa12.18□□□□□ -0.46
UBAP1-201ENST00000297661 WI2-2373I1.2A0A1W2PRP0 233 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 IGLL5B9A064 214 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 K7EIM0 57 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 HOXB4P17483 251 aaPredicted RBP12.17□□□□□ -0.46
UBAP1-201ENST00000297661 INSL3P51460 131 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 MTURNQ8N3F0 131 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 IL4P05112 153 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 CRIP1P50238 77 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 Q6AWC8 147 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 CEND1Q8N111 149 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 ITLN2Q8WWU7 325 aaPredicted RBP12.17□□□□□ -0.46
UBAP1-201ENST00000297661 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 MRPL51Q4U2R6 128 aaKnown RBP12.17□□□□□ -0.46
UBAP1-201ENST00000297661 HIST2H2BCQ6DN03 193 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 AMTNQ6UX39 209 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 TM2D2Q9BX73 214 aa12.17□□□□□ -0.46
UBAP1-201ENST00000297661 GEMIN7Q9H840 131 aaKnown RBP12.17□□□□□ -0.46
UBAP1-201ENST00000297661 IGHV3OR16-8A0A075B7F1 116 aa12.16□□□□□ -0.46
UBAP1-201ENST00000297661 SMKR1H3BMG3 65 aa12.16□□□□□ -0.46
UBAP1-201ENST00000297661 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
UBAP1-201ENST00000297661 HHLA3Q9XRX5 114 aa12.16□□□□□ -0.46
UBAP1-201ENST00000297661 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
UBAP1-201ENST00000297661 C19orf84I3L1E1 186 aa12.16□□□□□ -0.46
UBAP1-201ENST00000297661 MAP1AP78559 2803 aaPredicted RBP12.16□□□□□ -0.46
UBAP1-201ENST00000297661 CELSR1Q9NYQ6 3014 aa12.15□□□□□ -0.46
UBAP1-201ENST00000297661 TMSB15BA0A087X1C1 80 aa12.15□□□□□ -0.46
UBAP1-201ENST00000297661 NPYP01303 97 aa12.15□□□□□ -0.46
UBAP1-201ENST00000297661 ZNF562Q6V9R5 426 aa12.15□□□□□ -0.46
UBAP1-201ENST00000297661 FLNBO75369 2602 aaKnown RBP12.15□□□□□ -0.46
UBAP1-201ENST00000297661 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.47
UBAP1-201ENST00000297661 LY6LH3BQJ8 138 aa12.15□□□□□ -0.47
UBAP1-201ENST00000297661 GAGE13Q4V321 117 aa12.15□□□□□ -0.47
UBAP1-201ENST00000297661 PSG8Q9UQ74 426 aa12.15□□□□□ -0.47
UBAP1-201ENST00000297661 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
UBAP1-201ENST00000297661 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
UBAP1-201ENST00000297661 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
UBAP1-201ENST00000297661 CKS2P33552 79 aa12.14□□□□□ -0.47
UBAP1-201ENST00000297661 ODF1Q14990 250 aa12.14□□□□□ -0.47
UBAP1-201ENST00000297661 TMEM75Q8N9X5 138 aa12.14□□□□□ -0.47
UBAP1-201ENST00000297661 GTSCR1Q86UQ5 136 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 ZNF491Q8N8L2 437 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 RNF125Q96EQ8 232 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 NBR2O15453 112 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 C20orf78Q9BR46 151 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 SHANK2-AS3Q9BTD1 123 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 ZMAT4Q9H898 229 aa12.13□□□□□ -0.47
UBAP1-201ENST00000297661 MRPL16Q9NX20 251 aaKnown RBP12.13□□□□□ -0.47
UBAP1-201ENST00000297661 POLQO75417 2590 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 IGFL4Q6B9Z1 124 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 SIGLEC15Q6ZMC9 328 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 PRO0461Q9UI25 63 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
UBAP1-201ENST00000297661 PSMG4Q5JS54 123 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
UBAP1-201ENST00000297661 IGKCP01834 107 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 PRSS1P07477 247 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 NDPQ00604 133 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 DYNAPQ8N1N2 210 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 DPM3Q9P2X0 92 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 AGRNO00468 2067 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 BAHCC1Q9P281 2608 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 H3BRN7 92 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 VPS13CQ709C8 3753 aa12.11□□□□□ -0.47
UBAP1-201ENST00000297661 A0A1B0GWB2 263 aa12.1□□□□□ -0.47
UBAP1-201ENST00000297661 CFHR4Q92496 578 aa12.1□□□□□ -0.47
UBAP1-201ENST00000297661 LEPP41159 167 aa12.1□□□□□ -0.47
UBAP1-201ENST00000297661 EVI2AP22794 236 aa12.1□□□□□ -0.47
UBAP1-201ENST00000297661 APOMO95445 188 aa12.09□□□□□ -0.47
UBAP1-201ENST00000297661 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
UBAP1-201ENST00000297661 IGKV2-40A0A087WW87 121 aaPredicted RBP12.09□□□□□ -0.47
UBAP1-201ENST00000297661 IGKV2D-40P01614 121 aaPredicted RBP12.09□□□□□ -0.47
UBAP1-201ENST00000297661 C8orf86Q6ZUL3 223 aa12.09□□□□□ -0.47
UBAP1-201ENST00000297661 TTC9CQ8N5M4 171 aa12.09□□□□□ -0.47
UBAP1-201ENST00000297661 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
UBAP1-201ENST00000297661 FOXC2Q99958 501 aa12.09□□□□□ -0.47
UBAP1-201ENST00000297661 TWIST1Q15672 202 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 RRN3P1Q2M238 152 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 MAPKAPK5-AS1Q8N8E1 139 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 SYT8Q8NBV8 401 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 LY6G5BQ8NDX9 201 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
UBAP1-201ENST00000297661 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 C5orf64Q2M2E5 130 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 Q8TAT8 98 aa12.08□□□□□ -0.48
UBAP1-201ENST00000297661 FBN2P35556 2912 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
UBAP1-201ENST00000297661 DPM2O94777 84 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms