RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 SAPCD1Q5SSQ6 148 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 PRNTQ86SH4 94 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 FAM210AQ96ND0 272 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 X6R8D5 127 aa16.37■□□□□ 0.21
LINC01116-201ENST00000295549 RNASE4P34096 147 aaKnown RBP16.36■□□□□ 0.21
LINC01116-201ENST00000295549 RAB14P61106 215 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 UBE2G1P62253 170 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 PRR9Q5T870 116 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 IGHV3OR16-12A0A075B7B8 117 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 TRAV12-3A0A0B4J271 114 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 ZNF324O75467 553 aaPredicted RBP16.36■□□□□ 0.21
LINC01116-201ENST00000295549 NIPSNAP3BQ9BS92 247 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 TMEM208Q9BTX3 173 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 ZFP30Q9Y2G7 519 aa16.36■□□□□ 0.21
LINC01116-201ENST00000295549 STAB2Q8WWQ8 2551 aa16.35■□□□□ 0.21
LINC01116-201ENST00000295549 SMIM9A6NGZ8 99 aa16.35■□□□□ 0.21
LINC01116-201ENST00000295549 H7BYZ3 331 aa16.35■□□□□ 0.21
LINC01116-201ENST00000295549 MIFP14174 115 aa16.35■□□□□ 0.21
LINC01116-201ENST00000295549 BTN1A1Q13410 526 aa16.35■□□□□ 0.21
LINC01116-201ENST00000295549 Q86TA4 180 aa16.35■□□□□ 0.21
LINC01116-201ENST00000295549 NDUFS6O75380 124 aaKnown RBP16.34■□□□□ 0.21
LINC01116-201ENST00000295549 LTAP01374 205 aa16.34■□□□□ 0.21
LINC01116-201ENST00000295549 TOR2AQ5JU69 321 aa16.34■□□□□ 0.21
LINC01116-201ENST00000295549 Q6AWC8 147 aa16.34■□□□□ 0.21
LINC01116-201ENST00000295549 LINC01587Q99440 93 aa16.34■□□□□ 0.21
LINC01116-201ENST00000295549 EIF5A2Q9GZV4 153 aaKnown RBP16.34■□□□□ 0.21
LINC01116-201ENST00000295549 TAS2R60P59551 318 aa16.33■□□□□ 0.2
LINC01116-201ENST00000295549 RPL35P42766 123 aaKnown RBP16.32■□□□□ 0.2
LINC01116-201ENST00000295549 CLLU1Q5K131 121 aa16.32■□□□□ 0.2
LINC01116-201ENST00000295549 COX8CQ7Z4L0 72 aa16.32■□□□□ 0.2
LINC01116-201ENST00000295549 Q8NAQ8 132 aa16.32■□□□□ 0.2
LINC01116-201ENST00000295549 C8orf49Q96NF6 230 aa16.32■□□□□ 0.2
LINC01116-201ENST00000295549 TMEM250H0YL14 139 aa16.31■□□□□ 0.2
LINC01116-201ENST00000295549 SMUG1Q53HV7 270 aa16.31■□□□□ 0.2
LINC01116-201ENST00000295549 PYGO2Q9BRQ0 406 aa16.31■□□□□ 0.2
LINC01116-201ENST00000295549 DERL1Q9BUN8 251 aa16.31■□□□□ 0.2
LINC01116-201ENST00000295549 MED9Q9NWA0 146 aa16.31■□□□□ 0.2
LINC01116-201ENST00000295549 RRN3P1Q2M238 152 aa16.3■□□□□ 0.2
LINC01116-201ENST00000295549 LINC00467Q9BRT7 94 aa16.3■□□□□ 0.2
LINC01116-201ENST00000295549 IGHV4-28A0A0C4DH34 117 aa16.29■□□□□ 0.2
LINC01116-201ENST00000295549 BAGE2Q86Y30 109 aa16.29■□□□□ 0.2
LINC01116-201ENST00000295549 TMEM183AQ8IXX5 376 aa16.29■□□□□ 0.2
LINC01116-201ENST00000295549 C11orf68Q9H3H3 251 aaKnown RBP16.29■□□□□ 0.2
LINC01116-201ENST00000295549 TRAV21A0A0B4J279 112 aa16.28■□□□□ 0.2
LINC01116-201ENST00000295549 ZNF705GA8MUZ8 300 aaPredicted RBP16.28■□□□□ 0.2
LINC01116-201ENST00000295549 GCGP01275 180 aa16.28■□□□□ 0.2
LINC01116-201ENST00000295549 Q6ZQT7 251 aa16.28■□□□□ 0.2
LINC01116-201ENST00000295549 MLST8Q9BVC4 326 aa16.28■□□□□ 0.2
LINC01116-201ENST00000295549 RGS13O14921 159 aa16.28■□□□□ 0.2
LINC01116-201ENST00000295549 PFN1P07737 140 aaKnown RBP16.28■□□□□ 0.2
LINC01116-201ENST00000295549 ZNF80P51504 273 aaPredicted RBP16.28■□□□□ 0.2
LINC01116-201ENST00000295549 SMDT1Q9H4I9 107 aa16.28■□□□□ 0.2
LINC01116-201ENST00000295549 A0A0J9YWU9 116 aa16.27■□□□□ 0.19
LINC01116-201ENST00000295549 PRM2P04554 102 aa16.27■□□□□ 0.19
LINC01116-201ENST00000295549 HTN1P15515 57 aa16.27■□□□□ 0.19
LINC01116-201ENST00000295549 EDA2RQ9HAV5 297 aa16.27■□□□□ 0.19
LINC01116-201ENST00000295549 IGHV1OR15-1A0A075B7D0 117 aa16.26■□□□□ 0.19
LINC01116-201ENST00000295549 TMEM189A5PLL7 270 aa16.26■□□□□ 0.19
LINC01116-201ENST00000295549 AZU1P20160 251 aa16.26■□□□□ 0.19
LINC01116-201ENST00000295549 ZNF493Q6ZR52 646 aa16.26■□□□□ 0.19
LINC01116-201ENST00000295549 ZC2HC1AQ96GY0 325 aa16.26■□□□□ 0.19
LINC01116-201ENST00000295549 PEA15Q15121 130 aa16.25■□□□□ 0.19
LINC01116-201ENST00000295549 TDRG1Q3Y452 100 aa16.25■□□□□ 0.19
LINC01116-201ENST00000295549 ANXA2RQ3ZCQ2 193 aa16.25■□□□□ 0.19
LINC01116-201ENST00000295549 EIF4E3Q8N5X7 224 aaKnown RBP16.25■□□□□ 0.19
LINC01116-201ENST00000295549 SMIM12Q96EX1 92 aa16.25■□□□□ 0.19
LINC01116-201ENST00000295549 RAB19A4D1S5 217 aa16.24■□□□□ 0.19
LINC01116-201ENST00000295549 FABP5P3A8MUU1 101 aa16.24■□□□□ 0.19
LINC01116-201ENST00000295549 DEFB4AO15263 64 aa16.24■□□□□ 0.19
LINC01116-201ENST00000295549 SRP19P09132 144 aaKnown RBP16.24■□□□□ 0.19
LINC01116-201ENST00000295549 GNG4P50150 75 aa16.24■□□□□ 0.19
LINC01116-201ENST00000295549 CENPWQ5EE01 88 aa16.24■□□□□ 0.19
LINC01116-201ENST00000295549 RNASE8Q8TDE3 154 aaKnown RBP16.24■□□□□ 0.19
LINC01116-201ENST00000295549 TMEM263Q8WUH6 116 aaKnown RBP16.24■□□□□ 0.19
LINC01116-201ENST00000295549 C16orf74Q96GX8 76 aa16.24■□□□□ 0.19
LINC01116-201ENST00000295549 TRBV20OR9-2A0A075B6H5 130 aa16.23■□□□□ 0.19
LINC01116-201ENST00000295549 CRIP1P50238 77 aa16.23■□□□□ 0.19
LINC01116-201ENST00000295549 SRSF3P84103 164 aaKnown RBP16.23■□□□□ 0.19
LINC01116-201ENST00000295549 FAM162BQ5T6X4 162 aa16.23■□□□□ 0.19
LINC01116-201ENST00000295549 FAM159AQ6UWV7 190 aa16.23■□□□□ 0.19
LINC01116-201ENST00000295549 NHLRC2Q8NBF2 726 aa16.23■□□□□ 0.19
LINC01116-201ENST00000295549 PARLQ9H300 379 aa16.23■□□□□ 0.19
LINC01116-201ENST00000295549 C9JCJ5 164 aa16.22■□□□□ 0.19
LINC01116-201ENST00000295549 ZNF674Q2M3X9 581 aa16.22■□□□□ 0.19
LINC01116-201ENST00000295549 MUC21Q5SSG8 566 aa16.22■□□□□ 0.19
LINC01116-201ENST00000295549 PLAC8L1A1L4L8 177 aa16.21■□□□□ 0.19
LINC01116-201ENST00000295549 CBY3A6NI87 242 aa16.21■□□□□ 0.19
LINC01116-201ENST00000295549 IGLV2-8P01709 118 aa16.21■□□□□ 0.19
LINC01116-201ENST00000295549 KCNS1Q96KK3 526 aa16.21■□□□□ 0.19
LINC01116-201ENST00000295549 C11orf21Q9P2W6 132 aa16.21■□□□□ 0.19
LINC01116-201ENST00000295549 C9JQL5 133 aa16.2■□□□□ 0.18
LINC01116-201ENST00000295549 CEBPGP53567 150 aa16.2■□□□□ 0.18
LINC01116-201ENST00000295549 SH2D1AO60880 128 aa16.19■□□□□ 0.18
LINC01116-201ENST00000295549 EMP1P54849 157 aa16.19■□□□□ 0.18
LINC01116-201ENST00000295549 NAGKQ9UJ70 344 aa16.19■□□□□ 0.18
LINC01116-201ENST00000295549 TP53TG3Q9ULZ0 132 aa16.19■□□□□ 0.18
LINC01116-201ENST00000295549 IBA57Q5T440 356 aaKnown RBP16.19■□□□□ 0.18
LINC01116-201ENST00000295549 C11orf72Q8NBR9 251 aa16.19■□□□□ 0.18
LINC01116-201ENST00000295549 SMIM7Q9BQ49 75 aa16.18■□□□□ 0.18
LINC01116-201ENST00000295549 SDF2L1Q9HCN8 221 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms