RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
CCDC140-201ENST00000295226 C19orf73Q9NVV2 129 aa11.25□□□□□ -0.61
CCDC140-201ENST00000295226 EPDR1Q9UM22 224 aa11.25□□□□□ -0.61
CCDC140-201ENST00000295226 KLF12Q9Y4X4 402 aa11.25□□□□□ -0.61
CCDC140-201ENST00000295226 V9GYV3 84 aa11.25□□□□□ -0.61
CCDC140-201ENST00000295226 UBE2G1P62253 170 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 TMEM183AQ8IXX5 376 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 IGKV2-40A0A087WW87 121 aaPredicted RBP11.24□□□□□ -0.61
CCDC140-201ENST00000295226 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 IGKV2D-40P01614 121 aaPredicted RBP11.24□□□□□ -0.61
CCDC140-201ENST00000295226 IGLV2-8P01709 118 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 IBA57Q5T440 356 aaKnown RBP11.24□□□□□ -0.61
CCDC140-201ENST00000295226 GTSCR1Q86UQ5 136 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 BAGE2Q86Y30 109 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 Q8N1Y9 231 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 FMC1Q96HJ9 113 aa11.24□□□□□ -0.61
CCDC140-201ENST00000295226 MT-ND6P03923 174 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 ERCC8Q13216 396 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 WDR73Q6P4I2 378 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 CMTM2Q8TAZ6 248 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 SGK494Q96LW2 274 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 ASCL2Q99929 193 aa11.23□□□□□ -0.61
CCDC140-201ENST00000295226 IGKV3-20P01619 116 aa11.22□□□□□ -0.61
CCDC140-201ENST00000295226 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
CCDC140-201ENST00000295226 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
CCDC140-201ENST00000295226 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
CCDC140-201ENST00000295226 TRBV6-1A0A0K0K1D8 114 aa11.21□□□□□ -0.61
CCDC140-201ENST00000295226 XKRY2A2RUG3 117 aa11.21□□□□□ -0.61
CCDC140-201ENST00000295226 DIRC3C9JPN6 131 aa11.21□□□□□ -0.61
CCDC140-201ENST00000295226 OR5I1Q13606 314 aa11.21□□□□□ -0.61
CCDC140-201ENST00000295226 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
CCDC140-201ENST00000295226 VGLL1Q99990 258 aa11.21□□□□□ -0.61
CCDC140-201ENST00000295226 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 CSN1S1P47710 185 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
CCDC140-201ENST00000295226 RASL11AQ6T310 242 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 GNB1LQ9BYB4 327 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 TRAV8-1A0A0A6YYK1 113 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 IFITM10A6NMD0 228 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
CCDC140-201ENST00000295226 TCRAP04437 139 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 OR8A1Q8NGG7 326 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 MRPL53Q96EL3 112 aaKnown RBP11.2□□□□□ -0.62
CCDC140-201ENST00000295226 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
CCDC140-201ENST00000295226 A0A0J9YX75 114 aa11.19□□□□□ -0.62
CCDC140-201ENST00000295226 K7EQM0 130 aa11.19□□□□□ -0.62
CCDC140-201ENST00000295226 GATCO43716 136 aaKnown RBP11.19□□□□□ -0.62
CCDC140-201ENST00000295226 KPRPQ5T749 579 aaPredicted RBP11.19□□□□□ -0.62
CCDC140-201ENST00000295226 EBLN2Q6P2I7 272 aa11.19□□□□□ -0.62
CCDC140-201ENST00000295226 OR4B1Q8NGF8 309 aa11.19□□□□□ -0.62
CCDC140-201ENST00000295226 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
CCDC140-201ENST00000295226 H3BMM0 161 aa11.18□□□□□ -0.62
CCDC140-201ENST00000295226 RPL35AP18077 110 aaKnown RBP11.18□□□□□ -0.62
CCDC140-201ENST00000295226 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
CCDC140-201ENST00000295226 CT83Q5H943 113 aa11.18□□□□□ -0.62
CCDC140-201ENST00000295226 FOXI2Q6ZQN5 318 aa11.18□□□□□ -0.62
CCDC140-201ENST00000295226 AGPAT4-IT1Q9H0P7 198 aa11.18□□□□□ -0.62
CCDC140-201ENST00000295226 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
CCDC140-201ENST00000295226 SERTM2A0A1B0GWG4 89 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 LTAP01374 205 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 OR10D4PQ8NGN7 298 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 OR10J6PQ8NGY7 276 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 Q8TAT8 98 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 FAM110AQ9BQ89 295 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 MLST8Q9BVC4 326 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
CCDC140-201ENST00000295226 RBMY1BA6NDE4 496 aaKnown RBP11.17□□□□□ -0.62
CCDC140-201ENST00000295226 RBMY1EA6NEQ0 496 aaKnown RBP11.17□□□□□ -0.62
CCDC140-201ENST00000295226 RBMY1DP0C7P1 496 aaKnown RBP11.17□□□□□ -0.62
CCDC140-201ENST00000295226 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 FXYD7P58549 80 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 GFI1BQ5VTD9 330 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 STHQ8IWL8 128 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 TMEM18Q96B42 140 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 PACRGQ96M98 296 aaPredicted RBP11.17□□□□□ -0.62
CCDC140-201ENST00000295226 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
CCDC140-201ENST00000295226 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
CCDC140-201ENST00000295226 HLA-DQA1P01909 254 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 IGHV4-30-4P0DP06 118 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 FABP4P15090 132 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 NUDT10Q8NFP7 164 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 MRPL18Q9H0U6 180 aaKnown RBP11.16□□□□□ -0.62
CCDC140-201ENST00000295226 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
CCDC140-201ENST00000295226 K7EIL1 84 aa11.15□□□□□ -0.62
CCDC140-201ENST00000295226 IGLV2-11P01706 119 aa11.15□□□□□ -0.62
CCDC140-201ENST00000295226 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.62
CCDC140-201ENST00000295226 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.62
CCDC140-201ENST00000295226 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
CCDC140-201ENST00000295226 ZFP30Q9Y2G7 519 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms