RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SAMD13Q5VXD3 122 aa13.29□□□□□ -0.28
CCDC78-201ENST00000293889 NDUFAF3Q9BU61 184 aa13.29□□□□□ -0.28
CCDC78-201ENST00000293889 PRO1933Q9H354 126 aa13.29□□□□□ -0.28
CCDC78-201ENST00000293889 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
CCDC78-201ENST00000293889 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-201ENST00000293889 NOTCH1P46531 2555 aa13.29□□□□□ -0.28
CCDC78-201ENST00000293889 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 LINC00310P59036 64 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 SUMO1P63165 101 aaKnown RBP13.28□□□□□ -0.28
CCDC78-201ENST00000293889 C20orf173Q96LM9 149 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 C2orf88Q9BSF0 95 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 AAMDCQ9H7C9 122 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 G3V4G9 280 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 NUPR1O60356 82 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 ID1P41134 155 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 RASL11AQ6T310 242 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 CMTM2Q8TAZ6 248 aa13.28□□□□□ -0.28
CCDC78-201ENST00000293889 SORL1Q92673 2214 aa13.27□□□□□ -0.28
CCDC78-201ENST00000293889 M0R3E3 92 aa13.27□□□□□ -0.29
CCDC78-201ENST00000293889 ZNF688P0C7X2 276 aa13.27□□□□□ -0.29
CCDC78-201ENST00000293889 PRB4P10163 310 aaPredicted RBP13.27□□□□□ -0.29
CCDC78-201ENST00000293889 CRISP2P16562 243 aa13.27□□□□□ -0.29
CCDC78-201ENST00000293889 OR5I1Q13606 314 aa13.27□□□□□ -0.29
CCDC78-201ENST00000293889 PSG3Q16557 428 aa13.27□□□□□ -0.29
CCDC78-201ENST00000293889 SMIM12Q96EX1 92 aa13.27□□□□□ -0.29
CCDC78-201ENST00000293889 KIR2DL5BA0A0G2JN68 375 aa13.26□□□□□ -0.29
CCDC78-201ENST00000293889 KIR2DL5BA0A0G2JPC4 375 aa13.26□□□□□ -0.29
CCDC78-201ENST00000293889 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-201ENST00000293889 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
CCDC78-201ENST00000293889 SNRPD3P62318 126 aaKnown RBP13.26□□□□□ -0.29
CCDC78-201ENST00000293889 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
CCDC78-201ENST00000293889 SAMD5Q5TGI4 173 aa13.26□□□□□ -0.29
CCDC78-201ENST00000293889 TMEM136Q6ZRR5 245 aa13.26□□□□□ -0.29
CCDC78-201ENST00000293889 KIR2DL5AQ8N109 375 aa13.26□□□□□ -0.29
CCDC78-201ENST00000293889 ZNF705GA8MUZ8 300 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-201ENST00000293889 OR10J3Q5JRS4 329 aa13.25□□□□□ -0.29
CCDC78-201ENST00000293889 CLEC5AQ9NY25 188 aa13.25□□□□□ -0.29
CCDC78-201ENST00000293889 NAGKQ9UJ70 344 aa13.25□□□□□ -0.29
CCDC78-201ENST00000293889 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 GNG5P63218 68 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 PSMG4Q5JS54 123 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 C5orf17Q8NAS9 161 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 ZNF738Q8NE65 137 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 FBN3Q75N90 2809 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 HLA-DQA1P01909 254 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
CCDC78-201ENST00000293889 MAP6D1Q9H9H5 199 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 EPDR1Q9UM22 224 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 KLF12Q9Y4X4 402 aa13.24□□□□□ -0.29
CCDC78-201ENST00000293889 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
CCDC78-201ENST00000293889 DEFB1P60022 68 aa13.23□□□□□ -0.29
CCDC78-201ENST00000293889 ODF3L2Q3SX64 289 aa13.23□□□□□ -0.29
CCDC78-201ENST00000293889 MRPL52Q86TS9 123 aaKnown RBP13.23□□□□□ -0.29
CCDC78-201ENST00000293889 MRPL53Q96EL3 112 aaKnown RBP13.23□□□□□ -0.29
CCDC78-201ENST00000293889 RNASE7Q9H1E1 156 aaKnown RBP13.23□□□□□ -0.29
CCDC78-201ENST00000293889 PEX7O00628 323 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 SERF1AO75920 110 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 CSN1S1P47710 185 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 DEFB131AP59861 70 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 SSTP61278 116 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 TMEM183BQ1AE95 376 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 TEX43Q6ZNM6 134 aa13.22□□□□□ -0.29
CCDC78-201ENST00000293889 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.29
CCDC78-201ENST00000293889 DIRC3C9JPN6 131 aa13.21□□□□□ -0.29
CCDC78-201ENST00000293889 CD7P09564 240 aa13.21□□□□□ -0.29
CCDC78-201ENST00000293889 Q6ZWC4 215 aa13.21□□□□□ -0.29
CCDC78-201ENST00000293889 ARL6IP6Q8N6S5 226 aa13.21□□□□□ -0.29
CCDC78-201ENST00000293889 F6UB75 175 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 SCGB1D1O95968 90 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 TCRAP04437 139 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 FRMD6-AS1P0C7T7 363 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 C20orf144Q9BQM9 153 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 ATG101Q9BSB4 218 aa13.21□□□□□ -0.3
CCDC78-201ENST00000293889 IGKV2-40A0A087WW87 121 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-201ENST00000293889 OR11H12B2RN74 326 aa13.2□□□□□ -0.3
CCDC78-201ENST00000293889 IGKV2D-40P01614 121 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-201ENST00000293889 KRTAP10-11P60412 298 aa13.2□□□□□ -0.3
CCDC78-201ENST00000293889 EGFEM1PQ0D2K5 195 aa13.2□□□□□ -0.3
CCDC78-201ENST00000293889 ZNF124Q15973 351 aa13.2□□□□□ -0.3
CCDC78-201ENST00000293889 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-201ENST00000293889 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
CCDC78-201ENST00000293889 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
CCDC78-201ENST00000293889 GPX1P07203 203 aa13.19□□□□□ -0.3
CCDC78-201ENST00000293889 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-201ENST00000293889 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-201ENST00000293889 CMC4P56277 68 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-201ENST00000293889 GDF5OSQ5U4N7 250 aa13.19□□□□□ -0.3
CCDC78-201ENST00000293889 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
CCDC78-201ENST00000293889 BAGE2Q86Y30 109 aa13.19□□□□□ -0.3
CCDC78-201ENST00000293889 LINC00479Q96M42 142 aa13.19□□□□□ -0.3
CCDC78-201ENST00000293889 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
CCDC78-201ENST00000293889 GTSCR1Q86UQ5 136 aa13.18□□□□□ -0.3
CCDC78-201ENST00000293889 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
CCDC78-201ENST00000293889 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
CCDC78-201ENST00000293889 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
CCDC78-201ENST00000293889 KNCNA6PVL3 124 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
CCDC78-201ENST00000293889 ERCC8Q13216 396 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms