RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 TNFRSF6BO95407 300 aa12.97□□□□□ -0.33
CHRNE-201ENST00000293780 SRSF2Q01130 221 aaKnown RBP12.97□□□□□ -0.33
CHRNE-201ENST00000293780 GTF2H5Q6ZYL4 71 aa12.97□□□□□ -0.33
CHRNE-201ENST00000293780 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
CHRNE-201ENST00000293780 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
CHRNE-201ENST00000293780 NAA38Q9BRA0 125 aaKnown RBP12.97□□□□□ -0.33
CHRNE-201ENST00000293780 A1L4Q6 167 aa12.96□□□□□ -0.33
CHRNE-201ENST00000293780 JMJD8Q96S16 334 aa12.96□□□□□ -0.33
CHRNE-201ENST00000293780 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.34
CHRNE-201ENST00000293780 C9orf118A6NHY6 69 aa12.96□□□□□ -0.34
CHRNE-201ENST00000293780 TRGV3P03979 118 aa12.96□□□□□ -0.34
CHRNE-201ENST00000293780 DTX2Q86UW9 622 aa12.96□□□□□ -0.34
CHRNE-201ENST00000293780 TMEM238C9JI98 176 aa12.95□□□□□ -0.34
CHRNE-201ENST00000293780 GOSR1O95249 250 aa12.95□□□□□ -0.34
CHRNE-201ENST00000293780 SAA4P35542 130 aa12.95□□□□□ -0.34
CHRNE-201ENST00000293780 H3BRM9 83 aa12.95□□□□□ -0.34
CHRNE-201ENST00000293780 H3BUT2 72 aa12.95□□□□□ -0.34
CHRNE-201ENST00000293780 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
CHRNE-201ENST00000293780 CELSR1Q9NYQ6 3014 aa12.94□□□□□ -0.34
CHRNE-201ENST00000293780 A6NDN8 102 aa12.94□□□□□ -0.34
CHRNE-201ENST00000293780 UBE2E1P51965 193 aa12.94□□□□□ -0.34
CHRNE-201ENST00000293780 KLRB1Q12918 225 aa12.94□□□□□ -0.34
CHRNE-201ENST00000293780 FCER1GP30273 86 aa12.94□□□□□ -0.34
CHRNE-201ENST00000293780 TTTY13Q9BZ97 58 aa12.94□□□□□ -0.34
CHRNE-201ENST00000293780 LINC01546A6NGU7 62 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 IGKV2D-26A0A0A0MRZ7 120 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 TRAV26-2A0A0B4J265 109 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 RBAKDNA6NC62 111 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 G3V4G9 280 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 ODF1Q14990 250 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 OR9G4Q8NGQ1 327 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
CHRNE-201ENST00000293780 K7EP34 96 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 HSD52Q0P140 79 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 LY6DQ14210 128 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 NPFFR1Q9GZQ6 430 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 LINC00527Q9UJ94 153 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
CHRNE-201ENST00000293780 PRSS1P07477 247 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 RAB9AP51151 201 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 PRORYQ9H606 182 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 UBTD1Q9HAC8 227 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
CHRNE-201ENST00000293780 A0A0G2JLM5 398 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 CENPVL3A0A0U1RRI6 287 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 TMEM219Q86XT9 240 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 HHLA3Q9XRX5 114 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 HIVEP3Q5T1R4 2406 aa12.91□□□□□ -0.34
CHRNE-201ENST00000293780 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 IGHV7-4-1A0A0J9YVY3 117 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 SIVA1O15304 175 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 KLK9Q2XQG4 91 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 EEF1AKMT3Q96AZ1 226 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 KLK9Q9UKQ9 250 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 METTL26Q96S19 204 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 FOXC2Q99958 501 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
CHRNE-201ENST00000293780 IGHV3OR16-10A0A075B7F0 116 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 IGF1P05019 195 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 LMO4P61968 165 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 Q8N8P6 123 aa12.89□□□□□ -0.35
CHRNE-201ENST00000293780 GTSCR1Q86UQ5 136 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 J3KRW8 73 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 SPRY2O43597 315 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 PRR9Q5T870 116 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 NEGR1Q7Z3B1 354 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 C5orf56Q8N8D9 126 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 NRACQ8N912 160 aa12.88□□□□□ -0.35
CHRNE-201ENST00000293780 NPFFO15130 113 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 TRBV7-1A0A0A6YYK4 115 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 IGKCP01834 107 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 ATP5G2Q06055 141 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 U3KQE9 123 aa12.87□□□□□ -0.35
CHRNE-201ENST00000293780 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 C16orf92Q96LL3 132 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 SPCS1Q9Y6A9 102 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 A0A1W2PPM0 123 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 EFNA4P52798 201 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 DEFB1P60022 68 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 TMEM160Q9NX00 188 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 PKD1L2Q7Z442 2459 aa12.86□□□□□ -0.35
CHRNE-201ENST00000293780 H3BVH4 76 aa12.85□□□□□ -0.35
CHRNE-201ENST00000293780 ZC2HC1BQ5TFG8 222 aa12.85□□□□□ -0.35
CHRNE-201ENST00000293780 SPANXN1Q5VSR9 72 aa12.85□□□□□ -0.35
CHRNE-201ENST00000293780 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
CHRNE-201ENST00000293780 FXYD2P54710 66 aa12.85□□□□□ -0.35
CHRNE-201ENST00000293780 PIFOQ8TCI5 191 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms