RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 TTTY13Q9BZ97 58 aa14.77□□□□□ -0.04
LSM12-201ENST00000293406 C11orf21Q9P2W6 132 aa14.77□□□□□ -0.04
LSM12-201ENST00000293406 IGHV3OR16-13A0A075B7E8 117 aa14.77□□□□□ -0.05
LSM12-201ENST00000293406 IGHV3-74A0A0B4J1X5 117 aa14.77□□□□□ -0.05
LSM12-201ENST00000293406 DPM2O94777 84 aa14.77□□□□□ -0.05
LSM12-201ENST00000293406 TRGV3P03979 118 aa14.77□□□□□ -0.05
LSM12-201ENST00000293406 SMPXQ9UHP9 88 aa14.77□□□□□ -0.05
LSM12-201ENST00000293406 TLN1Q9Y490 2541 aaKnown RBP14.77□□□□□ -0.05
LSM12-201ENST00000293406 IGLV2-18A0A075B6J9 118 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 CLPSL1A2RUU4 121 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 ATP6V0E1O15342 81 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 TMEM78Q5T7P6 136 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 OR5A1Q8NGJ0 315 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 CLEC19AQ6UXS0 136 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 GTSCR1Q86UQ5 136 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 CHAC1Q9BUX1 264 aa14.76□□□□□ -0.05
LSM12-201ENST00000293406 TMEM8BA6NDV4 472 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 SMIM17P0DL12 118 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 FABP2P12104 132 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 FXYD2P54710 66 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 ZC2HC1BQ5TFG8 222 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 CSTL1Q9H114 145 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 SPTBN2O15020 2390 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 FOXC1Q12948 553 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 SAMD5Q5TGI4 173 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 CCDC140Q96MF4 163 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 SIRPDQ9H106 197 aa14.75□□□□□ -0.05
LSM12-201ENST00000293406 UFC1Q9Y3C8 167 aa14.74□□□□□ -0.05
LSM12-201ENST00000293406 RELNP78509 3460 aa14.74□□□□□ -0.05
LSM12-201ENST00000293406 IGHV3-49A0A0A0MS15 119 aa14.74□□□□□ -0.05
LSM12-201ENST00000293406 TRAV8-2A0A0B4J237 113 aa14.74□□□□□ -0.05
LSM12-201ENST00000293406 IGHV7-4-1A0A0J9YVY3 117 aa14.74□□□□□ -0.05
LSM12-201ENST00000293406 TMEM160Q9NX00 188 aa14.74□□□□□ -0.05
LSM12-201ENST00000293406 WNK2Q9Y3S1 2297 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 TRBV25-1A0A075B6N4 114 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 LAGE3Q14657 143 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 KLK9Q2XQG4 91 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 NRACQ8N912 160 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 MYOZ3Q8TDC0 251 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 METTL26Q96S19 204 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 KLK9Q9UKQ9 250 aa14.73□□□□□ -0.05
LSM12-201ENST00000293406 TRAV26-2A0A0B4J265 109 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 C8orf86Q6ZUL3 223 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 NEGR1Q7Z3B1 354 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 TRAV40A0A0B4J280 105 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 G3V318 75 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 G3V4G9 280 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 ZNF207O43670 478 aaKnown RBP14.72□□□□□ -0.05
LSM12-201ENST00000293406 ADORA2A-AS1P86434 159 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 EEF1AKMT3Q96AZ1 226 aa14.72□□□□□ -0.05
LSM12-201ENST00000293406 MRPL53Q96EL3 112 aaKnown RBP14.72□□□□□ -0.05
LSM12-201ENST00000293406 SPANXN1Q5VSR9 72 aa14.71□□□□□ -0.05
LSM12-201ENST00000293406 MRPL35Q9NZE8 188 aaKnown RBP14.71□□□□□ -0.05
LSM12-201ENST00000293406 PRSS47A8MTI9 375 aa14.71□□□□□ -0.05
LSM12-201ENST00000293406 HIF1ANQ9NWT6 349 aa14.71□□□□□ -0.05
LSM12-201ENST00000293406 UBE2E1P51965 193 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 RIPPLY3P57055 190 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 C9orf47Q6ZRZ4 202 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 LINC01548A6NM66 108 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 HLA-DRB4P13762 266 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 NBL1P41271 181 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 AJUBAQ96IF1 538 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 HLA-DRB4X5D2U9 266 aa14.7□□□□□ -0.06
LSM12-201ENST00000293406 HRNRQ86YZ3 2850 aaPredicted RBP14.7□□□□□ -0.06
LSM12-201ENST00000293406 TRBV7-1A0A0A6YYK4 115 aa14.69□□□□□ -0.06
LSM12-201ENST00000293406 K7ERJ3 54 aa14.69□□□□□ -0.06
LSM12-201ENST00000293406 SAA4P35542 130 aa14.69□□□□□ -0.06
LSM12-201ENST00000293406 Q6ZQT7 251 aa14.69□□□□□ -0.06
LSM12-201ENST00000293406 CEND1Q8N111 149 aa14.69□□□□□ -0.06
LSM12-201ENST00000293406 SRSF1Q07955 248 aaKnown RBP eCLIP14.69□□□□□ -0.06
LSM12-201ENST00000293406 TM2D2Q9BX73 214 aa14.69□□□□□ -0.06
LSM12-201ENST00000293406 IGHV4-4A0A075B6R2 117 aa14.68□□□□□ -0.06
LSM12-201ENST00000293406 NHP2Q9NX24 153 aaKnown RBP14.68□□□□□ -0.06
LSM12-201ENST00000293406 A0A087WX48 190 aa14.67□□□□□ -0.06
LSM12-201ENST00000293406 H3BVH4 76 aa14.67□□□□□ -0.06
LSM12-201ENST00000293406 PHLDA1Q8WV24 401 aaPredicted RBP14.67□□□□□ -0.06
LSM12-201ENST00000293406 C16orf92Q96LL3 132 aa14.67□□□□□ -0.06
LSM12-201ENST00000293406 EFNA4P52798 201 aa14.66□□□□□ -0.06
LSM12-201ENST00000293406 U3KQE9 123 aa14.66□□□□□ -0.06
LSM12-201ENST00000293406 CEP295Q9C0D2 2601 aa14.66□□□□□ -0.06
LSM12-201ENST00000293406 MAPKAPK5-AS1Q8N8E1 139 aa14.66□□□□□ -0.06
LSM12-201ENST00000293406 PTPRQQ9UMZ3 2332 aa14.66□□□□□ -0.06
LSM12-201ENST00000293406 PLNP26678 52 aa14.65□□□□□ -0.06
LSM12-201ENST00000293406 MRAP2Q96G30 205 aa14.65□□□□□ -0.06
LSM12-201ENST00000293406 SVEP1Q4LDE5 3571 aa14.65□□□□□ -0.06
LSM12-201ENST00000293406 CENPVL3A0A0U1RRI6 287 aa14.65□□□□□ -0.06
LSM12-201ENST00000293406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
LSM12-201ENST00000293406 ATP5G2Q06055 141 aa14.65□□□□□ -0.06
LSM12-201ENST00000293406 SPTA1P02549 2419 aa14.65□□□□□ -0.06
LSM12-201ENST00000293406 PRR9Q5T870 116 aa14.64□□□□□ -0.07
LSM12-201ENST00000293406 SMIM2Q9BVW6 85 aa14.64□□□□□ -0.07
LSM12-201ENST00000293406 K7EMI3 77 aa14.63□□□□□ -0.07
LSM12-201ENST00000293406 C5orf56Q8N8D9 126 aa14.63□□□□□ -0.07
LSM12-201ENST00000293406 ASH1LQ9NR48 2969 aaKnown RBP14.62□□□□□ -0.07
LSM12-201ENST00000293406 J3KRW8 73 aa14.62□□□□□ -0.07
LSM12-201ENST00000293406 TAL2Q16559 108 aa14.62□□□□□ -0.07
LSM12-201ENST00000293406 C9orf139Q6ZV77 190 aa14.62□□□□□ -0.07
LSM12-201ENST00000293406 LENEPQ9Y5L5 61 aa14.62□□□□□ -0.07
LSM12-201ENST00000293406 MED13LQ71F56 2210 aa14.62□□□□□ -0.07
LSM12-201ENST00000293406 A0A1W2PPR1 153 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms