RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
HMHB1-201ENST00000289448 CARHSP1Q9Y2V2 147 aaKnown RBP6.69□□□□□ -1.34
HMHB1-201ENST00000289448 A0A1W2PPV4 95 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 CBY3A6NI87 242 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 NPIPB6E9PJ23 425 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 F5H768 121 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 J3KRW8 73 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 NDUFS6O75380 124 aaKnown RBP6.68□□□□□ -1.34
HMHB1-201ENST00000289448 NDUFB4O95168 129 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 SFTA3P0C7M3 94 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 BCL2P10415 239 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 PPT1P50897 306 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 KHDC3LQ587J8 217 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 C10orf91Q5T1B1 145 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 SSX7Q7RTT5 188 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 OR1L4Q8NGR5 311 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 TIMM8BQ9Y5J9 83 aaPredicted RBP6.68□□□□□ -1.34
HMHB1-201ENST00000289448 LRP1BQ9NZR2 4599 aa6.68□□□□□ -1.34
HMHB1-201ENST00000289448 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 TRBV19A0A075B6N1 114 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 F8W036 122 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 H7BYZ3 331 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 M0R3E3 92 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 APOC3P02656 99 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 ATP5G1P05496 136 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 PYYP10082 97 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 ATP5G3P48201 142 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 FGF8P55075 233 aaPredicted RBP6.67□□□□□ -1.34
HMHB1-201ENST00000289448 ERCC8Q13216 396 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 ZNF493Q6ZR52 646 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 SVBPQ8N300 66 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 C15orf53Q8NAA6 179 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 TMEM263Q8WUH6 116 aaKnown RBP6.67□□□□□ -1.34
HMHB1-201ENST00000289448 PFDN5Q99471 154 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 MANBALQ9NQG1 85 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 GNG13Q9P2W3 67 aa6.67□□□□□ -1.34
HMHB1-201ENST00000289448 TRAV12-3A0A0B4J271 114 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 C9JQL5 133 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 ZNF253O75346 499 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 NUDT3O95989 172 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 CXorf1O96002 111 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 STAG3L2P0CL84 134 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 STAG3L3P0CL85 134 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 HIST1H1EP10412 219 aaKnown RBP6.66□□□□□ -1.34
HMHB1-201ENST00000289448 ADCYAP1P18509 176 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 TAS2R45P59539 299 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 ICAM4Q14773 271 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 ZNRF2Q8NHG8 242 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 RXFP4Q8TDU9 374 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 FAM167A-AS1Q96KT0 104 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 C20orf144Q9BQM9 153 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 SLC25A2Q9BXI2 301 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 MRPL32Q9BYC8 188 aaKnown RBP6.66□□□□□ -1.34
HMHB1-201ENST00000289448 TMEM14CQ9P0S9 112 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 VAX2Q9UIW0 290 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 FUT9Q9Y231 359 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 HSPG2P98160 4391 aa6.66□□□□□ -1.34
HMHB1-201ENST00000289448 HMGB3O15347 200 aaKnown RBP6.65□□□□□ -1.34
HMHB1-201ENST00000289448 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.34
HMHB1-201ENST00000289448 ARL14EPLP0DKL9 152 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 HOXA5P20719 270 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 LEPP41159 167 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 FAM3BP58499 235 aaPredicted RBP6.65□□□□□ -1.34
HMHB1-201ENST00000289448 SOHLH1Q5JUK2 328 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 MIR17HGQ75NE6 70 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 EXOC3-AS1Q8N2X6 119 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 BLNKQ8WV28 456 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 FAM19A4Q96LR4 140 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 ODF3Q96PU9 254 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 AGPAT4-IT1Q9H0P7 198 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 LINC00588Q9Y4M8 146 aa6.65□□□□□ -1.34
HMHB1-201ENST00000289448 GAGE12BA1L429 117 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 ZNF324O75467 553 aaPredicted RBP6.64□□□□□ -1.35
HMHB1-201ENST00000289448 EIF3GO75821 320 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMHB1-201ENST00000289448 GAGE7O76087 117 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 SNAPINO95295 136 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 GAGE12FP0CL80 117 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 GAGE12GP0CL81 117 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 GAGE12IP0CL82 117 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 GCHFRP30047 84 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 MEF2BQ02080 365 aaPredicted RBP6.64□□□□□ -1.35
HMHB1-201ENST00000289448 BTN1A1Q13410 526 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 C1orf134Q5TEV5 83 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 PQLC2Q6ZP29 291 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 Q6ZQT7 251 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 IQCF2Q8IXL9 164 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 MRPL53Q96EL3 112 aaKnown RBP6.64□□□□□ -1.35
HMHB1-201ENST00000289448 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 ATG101Q9BSB4 218 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 TMPRSS5Q9H3S3 457 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 TMEM167BQ9NRX6 74 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 ARL2-SNX15V9GYD0 113 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 MUC4Q99102 2169 aa6.64□□□□□ -1.35
HMHB1-201ENST00000289448 TRAV26-1A0A087WT03 109 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 IGKV2-40A0A087WW87 121 aaPredicted RBP6.63□□□□□ -1.35
HMHB1-201ENST00000289448 A0A0J9YY99 117 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 NBDYA0A0U1RRE5 68 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms