RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 PSMG4Q5JS54 123 aa11.4□□□□□ -0.58
NCK1-201ENST00000288986 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.58
NCK1-201ENST00000288986 C20orf173Q96LM9 149 aa11.4□□□□□ -0.58
NCK1-201ENST00000288986 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
NCK1-201ENST00000288986 VGLL1Q99990 258 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 FRMD6-AS1P0C7T7 363 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
NCK1-201ENST00000288986 S100PP25815 95 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
NCK1-201ENST00000288986 A8MZ25 164 aa11.38□□□□□ -0.59
NCK1-201ENST00000288986 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
NCK1-201ENST00000288986 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
NCK1-201ENST00000288986 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
NCK1-201ENST00000288986 KCNIP4Q6PIL6 250 aa11.37□□□□□ -0.59
NCK1-201ENST00000288986 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
NCK1-201ENST00000288986 TRAV9-1A0A075B6T8 112 aa11.37□□□□□ -0.59
NCK1-201ENST00000288986 FAM210BQ96KR6 192 aa11.37□□□□□ -0.59
NCK1-201ENST00000288986 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
NCK1-201ENST00000288986 TYMSP04818 313 aa11.36□□□□□ -0.59
NCK1-201ENST00000288986 CT83Q5H943 113 aa11.36□□□□□ -0.59
NCK1-201ENST00000288986 PRR27Q6MZM9 219 aa11.36□□□□□ -0.59
NCK1-201ENST00000288986 C8orf49Q96NF6 230 aa11.36□□□□□ -0.59
NCK1-201ENST00000288986 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
NCK1-201ENST00000288986 SMIM27A0A1W2PRY6 76 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
NCK1-201ENST00000288986 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
NCK1-201ENST00000288986 ZNF705GA8MUZ8 300 aaPredicted RBP11.35□□□□□ -0.59
NCK1-201ENST00000288986 GATCO43716 136 aaKnown RBP11.35□□□□□ -0.59
NCK1-201ENST00000288986 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
NCK1-201ENST00000288986 CRIP1P50238 77 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 FAM3BP58499 235 aaPredicted RBP11.35□□□□□ -0.59
NCK1-201ENST00000288986 ERCC8Q13216 396 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 ACTL10Q5JWF8 245 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 STHQ8IWL8 128 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 Q8TAT8 98 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 ASCL2Q99929 193 aa11.35□□□□□ -0.59
NCK1-201ENST00000288986 LOC102724200A0A096LPH7 203 aaPredicted RBP11.34□□□□□ -0.59
NCK1-201ENST00000288986 A0A1W2PPQ1 181 aa11.34□□□□□ -0.59
NCK1-201ENST00000288986 RPL35AP18077 110 aaKnown RBP11.34□□□□□ -0.59
NCK1-201ENST00000288986 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
NCK1-201ENST00000288986 RPP21Q9H633 154 aaKnown RBP11.34□□□□□ -0.59
NCK1-201ENST00000288986 LENEPQ9Y5L5 61 aa11.34□□□□□ -0.59
NCK1-201ENST00000288986 P01737 135 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 ZNF138P52744 262 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 DEFB1P60022 68 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 SBSPONQ8IVN8 264 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 B9D2Q9BPU9 175 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 TSKUQ8WUA8 353 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.6
NCK1-201ENST00000288986 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
NCK1-201ENST00000288986 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
NCK1-201ENST00000288986 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
NCK1-201ENST00000288986 TMEM78Q5T7P6 136 aa11.32□□□□□ -0.6
NCK1-201ENST00000288986 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
NCK1-201ENST00000288986 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
NCK1-201ENST00000288986 DAZAP1Q96EP5 407 aaKnown RBP11.32□□□□□ -0.6
NCK1-201ENST00000288986 F6UB75 175 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 SMUG1Q53HV7 270 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 FOXI2Q6ZQN5 318 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 FAM231BA6NCW3 169 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 A8MWL6 223 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
NCK1-201ENST00000288986 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 GFRA4Q9GZZ7 299 aa11.31□□□□□ -0.6
NCK1-201ENST00000288986 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
NCK1-201ENST00000288986 AGRNO00468 2067 aa11.3□□□□□ -0.6
NCK1-201ENST00000288986 PHOX2AO14813 284 aa11.3□□□□□ -0.6
NCK1-201ENST00000288986 APOC4P55056 127 aa11.3□□□□□ -0.6
NCK1-201ENST00000288986 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
NCK1-201ENST00000288986 H3BMM0 161 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 SH2D1AO60880 128 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 ZNF705DP0CH99 300 aaPredicted RBP11.29□□□□□ -0.6
NCK1-201ENST00000288986 ZNF705BP0CI00 300 aaPredicted RBP11.29□□□□□ -0.6
NCK1-201ENST00000288986 HLA-DRB4P13762 266 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 FOXA3P55318 350 aaPredicted RBP11.29□□□□□ -0.6
NCK1-201ENST00000288986 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
NCK1-201ENST00000288986 NEU1Q99519 415 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 HLA-DRB4X5D2U9 266 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 C1orf196B1AJZ1 125 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 NAT8BQ9UHF3 227 aa11.29□□□□□ -0.6
NCK1-201ENST00000288986 KIR2DL5BA0A0G2JN68 375 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 KIR2DL5BA0A0G2JPC4 375 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 A0A0J9YX75 114 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 KIR2DL5AQ8N109 375 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms