RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 Q8N976 141 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 TMEM158Q8WZ71 300 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 MSRB2Q9Y3D2 182 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 CRYGBP07316 175 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 EFNA4P52798 201 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 DUX5Q96PT3 197 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 F6UB75 175 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 PLP1P60201 277 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 ZNF747Q9BV97 191 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
SMAD6-201ENST00000288840 UBE2V1Q13404 147 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 OR11H6Q8NGC7 330 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 PKD1L2Q7Z442 2459 aa12.4□□□□□ -0.42
SMAD6-201ENST00000288840 A0A1B0GW15 77 aa12.39□□□□□ -0.43
SMAD6-201ENST00000288840 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
SMAD6-201ENST00000288840 FOXE3Q13461 319 aa12.39□□□□□ -0.43
SMAD6-201ENST00000288840 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
SMAD6-201ENST00000288840 C14orf178Q8N769 122 aaPredicted RBP12.39□□□□□ -0.43
SMAD6-201ENST00000288840 CCL19Q99731 98 aa12.39□□□□□ -0.43
SMAD6-201ENST00000288840 ASH1LQ9NR48 2969 aaKnown RBP12.39□□□□□ -0.43
SMAD6-201ENST00000288840 TMEM238LA0A1B0GVL6 79 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 TNFRSF6BO95407 300 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 CTRLP40313 264 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 EMP1P54849 157 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 PDE6HQ13956 83 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 TNFRSF13BO14836 293 aaPredicted RBP12.38□□□□□ -0.43
SMAD6-201ENST00000288840 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 MINOS1Q5TGZ0 78 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 MINOS1-NBL1R4GNA1 71 aa12.38□□□□□ -0.43
SMAD6-201ENST00000288840 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 AGPAT4-IT1Q9H0P7 198 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
SMAD6-201ENST00000288840 GTF2H5Q6ZYL4 71 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 Q8N9W7 124 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 HIST1H4GQ99525 98 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
SMAD6-201ENST00000288840 FSTL3O95633 263 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 CFHR4Q92496 578 aa12.37□□□□□ -0.43
SMAD6-201ENST00000288840 MTORP42345 2549 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 SRSF9Q13242 221 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMAD6-201ENST00000288840 C8orf86Q6ZUL3 223 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 K7ERU9 68 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 RAB9AP51151 201 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 BVES-AS1Q5T3Y7 98 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 SLC50A1Q9BRV3 221 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
SMAD6-201ENST00000288840 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
SMAD6-201ENST00000288840 SRSF8Q9BRL6 282 aaKnown RBP12.35□□□□□ -0.43
SMAD6-201ENST00000288840 UBE2E1P51965 193 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 TTC9CQ8N5M4 171 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 ORAOV1Q8WV07 137 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 SCGB3A1Q96QR1 104 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 IGHV2-70DA0A0C4DH43 119 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 OVOL3O00110 214 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 GAS8-AS1O95177 125 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 DTX2Q86UW9 622 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 NRGNQ92686 78 aa12.35□□□□□ -0.43
SMAD6-201ENST00000288840 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
SMAD6-201ENST00000288840 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
SMAD6-201ENST00000288840 MS4A6AQ9H2W1 248 aa12.34□□□□□ -0.43
SMAD6-201ENST00000288840 WI2-2373I1.2A0A1W2PRP0 233 aa12.34□□□□□ -0.43
SMAD6-201ENST00000288840 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
SMAD6-201ENST00000288840 Q6ZQT7 251 aa12.34□□□□□ -0.43
SMAD6-201ENST00000288840 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
SMAD6-201ENST00000288840 NPBQ8NG41 125 aa12.33□□□□□ -0.44
SMAD6-201ENST00000288840 LY6LH3BQJ8 138 aa12.33□□□□□ -0.44
SMAD6-201ENST00000288840 FAM159AQ6UWV7 190 aa12.33□□□□□ -0.44
SMAD6-201ENST00000288840 FAM110DQ8TAY7 271 aaPredicted RBP12.33□□□□□ -0.44
SMAD6-201ENST00000288840 ASIPP42127 132 aa12.33□□□□□ -0.44
SMAD6-201ENST00000288840 BLCAPP62952 87 aa12.33□□□□□ -0.44
SMAD6-201ENST00000288840 FABP2P12104 132 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 TRBV12-3P01733 135 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 MTURNQ8N3F0 131 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 NXT2Q9NPJ8 142 aaKnown RBP12.32□□□□□ -0.44
SMAD6-201ENST00000288840 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 SPCS1Q9Y6A9 102 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 TGFAP01135 160 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 CD7P09564 240 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 GAGE1Q13065 139 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 OR2K2Q8NGT1 345 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 EPG5Q9HCE0 2579 aa12.32□□□□□ -0.44
SMAD6-201ENST00000288840 A0A087WWL8 130 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 BUB3O43684 328 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 IGKCP01834 107 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 OR4X2Q8NGF9 303 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 NPFFR1Q9GZQ6 430 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 H7C2G1 150 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.31□□□□□ -0.44
SMAD6-201ENST00000288840 IGF1P05019 195 aa12.31□□□□□ -0.44
SMAD6-201ENST00000288840 COX8AP10176 69 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms