RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 A0A1W2PPM0 123 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 GCSHP23434 173 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 MINOS1Q5TGZ0 78 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 FAM110DQ8TAY7 271 aaPredicted RBP10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 MINOS1-NBL1R4GNA1 71 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 IGHV3-49A0A0A0MS15 119 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 IGKCP01834 107 aa10.2□□□□□ -0.78
SLC28A1-201ENST00000286749 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 RBAKDNA6NC62 111 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 K7ENP7 123 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 ATP6V0E1O15342 81 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 C11orf71Q6IPW1 123 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 C1orf122Q6ZSJ8 110 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 Q8N8P6 123 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 SLC50A1Q9BRV3 221 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 SPCS1Q9Y6A9 102 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 IGLV2-18A0A075B6J9 118 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 ZNF207O43670 478 aaKnown RBP10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 GOSR1O95249 250 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 FXYD2P54710 66 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 FOXC1Q12948 553 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 CLEC19AQ6UXS0 136 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 CHAC1Q9BUX1 264 aa10.19□□□□□ -0.78
SLC28A1-201ENST00000286749 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 RAB9AP51151 201 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 Q6ZQT7 251 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 TMEM8BA6NDV4 472 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 DPM2O94777 84 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 UFC1Q9Y3C8 167 aa10.18□□□□□ -0.78
SLC28A1-201ENST00000286749 TRAV8-2A0A0B4J237 113 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 G3V318 75 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 SMIM17P0DL12 118 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 SIRPDQ9H106 197 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 ASH1LQ9NR48 2969 aaKnown RBP10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 K7ERJ3 54 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 ATP5LO75964 103 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 FABP2P12104 132 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 RIPPLY3P57055 190 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 SAMD5Q5TGI4 173 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
SLC28A1-201ENST00000286749 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 IGHV7-4-1A0A0J9YVY3 117 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 LINC01548A6NM66 108 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 ADORA2A-AS1P86434 159 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 NRACQ8N912 160 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 OR5A1Q8NGJ0 315 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 TRAV40A0A0B4J280 105 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 C8orf86Q6ZUL3 223 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 MRPL35Q9NZE8 188 aaKnown RBP10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 SMPXQ9UHP9 88 aa10.16□□□□□ -0.78
SLC28A1-201ENST00000286749 LAGE3Q14657 143 aa10.15□□□□□ -0.78
SLC28A1-201ENST00000286749 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
SLC28A1-201ENST00000286749 AJUBAQ96IF1 538 aa10.15□□□□□ -0.78
SLC28A1-201ENST00000286749 SVEP1Q4LDE5 3571 aa10.15□□□□□ -0.78
SLC28A1-201ENST00000286749 G3V4G9 280 aa10.15□□□□□ -0.79
SLC28A1-201ENST00000286749 METTL26Q96S19 204 aa10.15□□□□□ -0.79
SLC28A1-201ENST00000286749 K7EMI3 77 aa10.14□□□□□ -0.79
SLC28A1-201ENST00000286749 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
SLC28A1-201ENST00000286749 MYOZ3Q8TDC0 251 aa10.14□□□□□ -0.79
SLC28A1-201ENST00000286749 SAA4P35542 130 aa10.14□□□□□ -0.79
SLC28A1-201ENST00000286749 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
SLC28A1-201ENST00000286749 NHP2Q9NX24 153 aaKnown RBP10.14□□□□□ -0.79
SLC28A1-201ENST00000286749 AGRNO00468 2067 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 EFNA4P52798 201 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 MAPKAPK5-AS1Q8N8E1 139 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 SPTBN1Q01082 2364 aaKnown RBP10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 H3BVH4 76 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 UBE2E1P51965 193 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 KLK9Q2XQG4 91 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 C9orf47Q6ZRZ4 202 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 CEND1Q8N111 149 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 KLK9Q9UKQ9 250 aa10.13□□□□□ -0.79
SLC28A1-201ENST00000286749 NCOR2Q9Y618 2525 aa10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 PRR9Q5T870 116 aa10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 ATRXP46100 2492 aa10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 J3KRW8 73 aa10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 MRPL53Q96EL3 112 aaKnown RBP10.12□□□□□ -0.79
SLC28A1-201ENST00000286749 A0A087WX48 190 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 A0A1W2PPR1 153 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 IGF1P05019 195 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 TM2D2Q9BX73 214 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 IGHV4-4A0A075B6R2 117 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 SRSF1Q07955 248 aaKnown RBP eCLIP10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 HIF1ANQ9NWT6 349 aa10.11□□□□□ -0.79
SLC28A1-201ENST00000286749 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms